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辅酶钴胺素(II)水合作用的高分辨率中子晶体学研究。

High-resolution neutron crystallographic studies of the hydration of the coenzyme cob(II)alamin.

作者信息

Jogl Gerwald, Wang Xiaoping, Mason Sax A, Kovalevsky Andrey, Mustyakimov Marat, Fisher Zöe, Hoffman Christina, Kratky Christoph, Langan Paul

机构信息

Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI 02912, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 2011 Jun;67(Pt 6):584-91. doi: 10.1107/S090744491101496X. Epub 2011 May 19.

Abstract

The hydration of the coenzyme cob(II)alamin has been studied using high-resolution monochromatic neutron crystallographic data collected at room temperature to a resolution of 0.92 Å on the original D19 diffractometer with a prototype 4° × 64° detector at the high-flux reactor neutron source run by the Institute Laue-Langevin. The resulting structure provides hydrogen-bonding parameters for the hydration of biomacromolecules to unprecedented accuracy. These experimental parameters will be used to define more accurate force fields for biomacromolecular structure refinement. The presence of a hydrophobic bowl motif surrounded by flexible side chains with terminal functional groups may be significant for the efficient scavenging of ligands. The feasibility of extending the resolution of this structure to ultrahigh resolution was investigated by collecting time-of-flight neutron crystallographic data during commissioning of the TOPAZ diffractometer with a prototype array of 14 modular 2° × 21° detectors at the Spallation Neutron Source run by Oak Ridge National Laboratory.

摘要

使用在室温下收集的高分辨率单色中子晶体学数据,在劳厄 - 朗之万研究所运行的高通量反应堆中子源上,通过带有原型4°×64°探测器的原始D19衍射仪,对辅酶钴胺素(II)(cob(II)alamin)的水合作用进行了研究,分辨率达到0.92 Å。所得结构以前所未有的精度提供了生物大分子水合作用的氢键参数。这些实验参数将用于定义更精确的生物大分子结构精修力场。由带有末端官能团的柔性侧链包围的疏水碗状基序的存在,可能对配体的有效清除具有重要意义。在橡树岭国家实验室运行的散裂中子源上,通过在TOPAZ衍射仪调试期间收集飞行时间中子晶体学数据,使用由14个模块化2°×21°探测器组成的原型阵列,研究了将该结构分辨率扩展到超高分辨率的可行性。

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