Shin J S, Kim B G
Division of Chemical Engineering and Institute for Molecular Biology and Genetics, Seoul National University 151-742, Seoul, Korea.
Biotechnol Bioeng. 1998 Dec 5;60(5):534-40. doi: 10.1002/(sici)1097-0290(19981205)60:5<534::aid-bit3>3.0.co;2-l.
A kinetic model for omega-transaminase from Bacillus thuringiensis JS64 was developed by using the King-Altman method to simulate the kinetic resolution of alpha-methylbenzylamine (alpha-MBA). Starting from a ping-pong bi-bi mechanism, a complete kinetic model including substrate inhibition only in the reverse reaction (i.e., transamination between acetophenone and L-alanine) was developed. The asymmetric synthesis of (S)-alpha-MBA proved to be difficult due to a much lower maximum reverse reaction rate than the maximum forward reaction rate, thermodynamically exergonic forward reaction (i.e., transamination between (S)-alpha-MBA and pyruvate), and the severe product and substrate inhibition of the reverse reaction. Experimental values for kinetic parameters show that the product inhibition constant of (S)-alpha-MBA is the most important parameter on determining the resolution reaction rate, suggesting that the resolution reaction rate will be very low unless (S)-alpha-MBA strongly inhibits the reverse reaction. Using the kinetic model, the kinetic resolution of alpha-MBA in aqueous buffer was simulated, and the simulation results showed a high degree of consistency with experimental data over a range of reaction conditions. Various simulation results suggest that the crucial bottleneck in the kinetic resolution of alpha-MBA lies mainly in the accumulation of acetophenone in reaction media as the reaction proceeds, whereas L-alanine exerts a little inhibitory effect on the reaction. The model predicts that removing acetophenone produced during the reaction can enhance the reaction rate dramatically. Indeed, the biphasic reaction system is capable of extracting acetophenone from the aqueous phase, showing a much higher reaction rate compared to a monophasic reaction system. The kinetic model was also useful in predicting the properties of other, better enzymes as well as the optimal concentrations of amino acceptor and enzyme in the resolution reaction.
通过使用金-奥特曼方法建立了苏云金芽孢杆菌JS64来源的ω-转氨酶的动力学模型,以模拟α-甲基苄胺(α-MBA)的动力学拆分过程。从乒乓双底物机制出发,建立了一个完整的动力学模型,该模型仅在逆反应(即苯乙酮与L-丙氨酸之间的转氨反应)中存在底物抑制。由于最大逆反应速率远低于最大正反应速率、正反应在热力学上是放能反应(即(S)-α-MBA与丙酮酸之间的转氨反应)以及逆反应存在严重的产物和底物抑制,(S)-α-MBA的不对称合成被证明是困难的。动力学参数的实验值表明,(S)-α-MBA的产物抑制常数是决定拆分反应速率的最重要参数,这表明除非(S)-α-MBA强烈抑制逆反应,否则拆分反应速率将非常低。利用该动力学模型,模拟了α-MBA在水性缓冲液中的动力学拆分过程,模拟结果在一系列反应条件下与实验数据高度一致。各种模拟结果表明,α-MBA动力学拆分的关键瓶颈主要在于随着反应进行苯乙酮在反应介质中的积累,而L-丙氨酸对反应的抑制作用较小。该模型预测,去除反应过程中产生的苯乙酮可显著提高反应速率。实际上,双相反应体系能够从水相中萃取苯乙酮,与单相反应体系相比,其反应速率要高得多。该动力学模型还可用于预测其他性能更好的酶的特性以及拆分反应中氨基受体和酶的最佳浓度。