Bon C, Lehmann M S, Wilkinson C
Université Joseph Fourier, F-38400 Saint Martin d'Hères, France and Institut Laue-Langevin, F-38042 Grenoble, France.
Acta Crystallogr D Biol Crystallogr. 1999 May;55(Pt 5):978-87. doi: 10.1107/s0907444998018514.
Triclinic crystals of lysozyme, hydrogen-deuterium exchanged in deuterated solvent, have been studied using neutron quasi-Laue techniques and a newly developed cylinder image-plate detector. The wavelength range employed was from 2.7 to 3.5 A, which gave 9426 significant reflections [F >/= 2sigma(F)] to a resolution limit of 1. 7 A. The deuteration states of the H atoms in the protein molecule were identified, followed by an extensive analysis of the water structure surrounding the protein. The final R factor was 20.4% (Rfree = 22.1%). In total, the 244 observed water molecules form approximately one layer of water around the protein with far fewer water molecules located further away. Water molecules covering the apolar patches make tangential layers at 4-5 A from the surface or form C-H...O contacts, and several water-molecule sites can be identified in the apolar cavities. Many of the water molecules are apparently orientationally disordered, and only 115 out of the 244 water molecules sit in mean single orientations. Comparison of these results with quasi-elastic neutron scattering observations of the water dynamics leads to a picture of the water molecules forming an extended constantly fluctuating network covering the protein surface.
已使用中子准劳厄技术和新开发的圆柱成像板探测器对在氘代溶剂中进行氢-氘交换的溶菌酶三斜晶体进行了研究。所采用的波长范围为2.7至3.5埃,这产生了9426个显著反射[F≥2σ(F)],分辨率极限为1.7埃。确定了蛋白质分子中H原子的氘代状态,随后对蛋白质周围的水结构进行了广泛分析。最终的R因子为20.4%(Rfree = 22.1%)。总共,观察到的244个水分子在蛋白质周围形成了大约一层水,更远距离处的水分子则少得多。覆盖非极性斑块的水分子在距表面4 - 5埃处形成切向层或形成C-H...O接触,并且在非极性腔中可以识别出几个水分子位点。许多水分子显然在取向方面是无序的,244个水分子中只有115个以平均单一取向存在。将这些结果与水动力学的准弹性中子散射观察结果进行比较,得出了水分子形成覆盖蛋白质表面的扩展的不断波动网络的图景。