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1
The iso-competition point for counterion competition binding to DNA: calculated multivalent versus monovalent cation binding equivalence.抗衡离子与DNA竞争结合的等竞争点:计算得到的多价阳离子与单价阳离子结合等效性
Biophys J. 1999 Jul;77(1):114-22. doi: 10.1016/S0006-3495(99)76876-1.
2
A gel electrophoresis study of the competitive effects of monovalent counterion on the extent of divalent counterions binding to DNA.一项关于单价抗衡离子对二价抗衡离子与DNA结合程度的竞争效应的凝胶电泳研究。
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The iso-competition point, a new concept for characterizing multivalent versus monovalent counterion competition, successfully describes cation binding to DNA.等竞争点是用于表征多价与单价抗衡离子竞争的一个新概念,它成功地描述了阳离子与DNA的结合。
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本文引用的文献

1
A gel electrophoresis study of the competitive effects of monovalent counterion on the extent of divalent counterions binding to DNA.一项关于单价抗衡离子对二价抗衡离子与DNA结合程度的竞争效应的凝胶电泳研究。
Biophys J. 1998 Feb;74(2 Pt 1):964-73. doi: 10.1016/S0006-3495(98)74019-6.
2
Trivalent counterion condensation on DNA measured by pulse gel electrophoresis.通过脉冲凝胶电泳测量三价抗衡离子在DNA上的凝聚作用。
Biopolymers. 1996 Mar;38(3):367-76. doi: 10.1002/(sici)1097-0282(199603)38:3<367::aid-bip9>3.0.co;2-s.
3
Polyelectrolyte counterion condensation theory explains differential scanning calorimetry studies of salt-induced condensation of chicken erythrocyte chromatin.聚电解质反离子凝聚理论解释了盐诱导鸡红细胞染色质凝聚的差示扫描量热法研究。
Biochemistry. 1996 Mar 12;35(10):3319-27. doi: 10.1021/bi951636j.
4
Gel electrophoresis measurement of counterion condensation on DNA.用于测量DNA上抗衡离子凝聚的凝胶电泳法
Biopolymers. 1995 Feb;35(2):211-6. doi: 10.1002/bip.360350209.
5
Structure of viral phi 29 DNA condensed by simple triamines: a light-scattering and electron-microscopy study.简单三胺凝聚的病毒φ29 DNA结构:光散射和电子显微镜研究
Biopolymers. 1981 Mar;20(3):469-88. doi: 10.1002/bip.1981.360200305.
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Interactions of DNA with divalent metal ions. III. Extent of metal binding: experiment and theory.DNA与二价金属离子的相互作用。III. 金属结合程度:实验与理论
Biopolymers. 1982 Jan;21(1):219-32. doi: 10.1002/bip.360210117.
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Evidence for hydrated spermidine-calf thymus DNA toruses organized by circumferential DNA wrapping.通过圆周DNA包裹形成水合亚精胺-小牛胸腺DNA环的证据。
Nucleic Acids Res. 1983 Mar 25;11(6):1839-54. doi: 10.1093/nar/11.6.1839.
8
Cation-induced toroidal condensation of DNA studies with Co3+(NH3)6.用六氨合钴(III)对阳离子诱导的DNA环形凝聚进行的研究
J Mol Biol. 1980 Dec 25;144(4):431-53. doi: 10.1016/0022-2836(80)90330-7.
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Spermidine-condensed phi X174 DNA cleavage by micrococcal nuclease: torus cleavage model and evidence for unidirectional circumferential DNA wrapping.微球菌核酸酶对亚精胺凝聚的φX174 DNA的切割:环形切割模型及单向圆周DNA缠绕的证据
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A study of phi X-174 DNA torus and lambda DNA torus tertiary structure and the implications for DNA self-assembly.φX-174 DNA环面和λDNA环面三级结构的研究及其对DNA自组装的意义。
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抗衡离子与DNA竞争结合的等竞争点:计算得到的多价阳离子与单价阳离子结合等效性

The iso-competition point for counterion competition binding to DNA: calculated multivalent versus monovalent cation binding equivalence.

作者信息

Li A Z, Marx K A

机构信息

Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854 USA.

出版信息

Biophys J. 1999 Jul;77(1):114-22. doi: 10.1016/S0006-3495(99)76876-1.

DOI:10.1016/S0006-3495(99)76876-1
PMID:10388744
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1300316/
Abstract

In this paper we introduce an important parameter called the iso-competition point (ICP), to characterize the competition binding to DNA in a two-cation-species system. By imposing the condition of charge neutralization fraction equivalence theta1 = ZthetaZ upon the two simultaneous equations in Manning's counterion condensation theory, the ICPs can be calculated. Each ICP, which refers to a particular multivalent concentration where the charge fraction on DNA neutralized from monovalent cations equals that from the multivalent cations, corresponds to a specific ionic strength condition. At fixed ionic strength, the total DNA charge neutralization fractions thetaICP are equal, no matter whether the higher valence cation is divalent, trivalent, or tetravalent. The ionic strength effect on ICP can be expressed by a semiquantitative equation as ICPZa/ICPZb = (Ia/Ib)Z, where Ia, Ib refers to the instance of ionic strengths and Z indicates the valence. The ICP can be used to interpret and characterize the ionic strength, valence, and DNA length effects on the counterion competition binding in a two-species system. Data from our previous investigations involving binding of Mg2+, Ca2+, and Co(NH3)63+ to lambda-DNA-HindIII fragments ranging from 2.0 to 23.1 kbp was used to investigate the applicability of ICP to describe counterion binding. It will be shown that the ICP parameter presents a prospective picture of the counterion competition binding to polyelectrolyte DNA under a specific ion environment condition.

摘要

在本文中,我们引入了一个重要参数——等竞争点(ICP),以表征双阳离子体系中与DNA的竞争结合。通过在曼宁反离子凝聚理论的两个联立方程中施加电荷中和分数等效条件θ1 = ZθZ,可以计算出ICP。每个ICP指的是单价阳离子中和的DNA上的电荷分数与多价阳离子中和的电荷分数相等时的特定多价浓度,对应于特定的离子强度条件。在固定离子强度下,无论高价阳离子是二价、三价还是四价,总的DNA电荷中和分数θICP都是相等的。离子强度对ICP的影响可以用一个半定量方程表示为ICPZa/ICPZb = (Ia/Ib)Z,其中Ia、Ib指离子强度的情况,Z表示价态。ICP可用于解释和表征离子强度、价态以及DNA长度对双物种体系中反离子竞争结合的影响。我们之前涉及Mg2+、Ca2+和Co(NH3)63+与2.0至23.1 kbp的λ-DNA-HindIII片段结合的研究数据被用于研究ICP描述反离子结合的适用性。结果将表明,ICP参数呈现了在特定离子环境条件下反离子与聚电解质DNA竞争结合的前景。