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抗衡离子与DNA竞争结合的等竞争点:计算得到的多价阳离子与单价阳离子结合等效性

The iso-competition point for counterion competition binding to DNA: calculated multivalent versus monovalent cation binding equivalence.

作者信息

Li A Z, Marx K A

机构信息

Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854 USA.

出版信息

Biophys J. 1999 Jul;77(1):114-22. doi: 10.1016/S0006-3495(99)76876-1.

Abstract

In this paper we introduce an important parameter called the iso-competition point (ICP), to characterize the competition binding to DNA in a two-cation-species system. By imposing the condition of charge neutralization fraction equivalence theta1 = ZthetaZ upon the two simultaneous equations in Manning's counterion condensation theory, the ICPs can be calculated. Each ICP, which refers to a particular multivalent concentration where the charge fraction on DNA neutralized from monovalent cations equals that from the multivalent cations, corresponds to a specific ionic strength condition. At fixed ionic strength, the total DNA charge neutralization fractions thetaICP are equal, no matter whether the higher valence cation is divalent, trivalent, or tetravalent. The ionic strength effect on ICP can be expressed by a semiquantitative equation as ICPZa/ICPZb = (Ia/Ib)Z, where Ia, Ib refers to the instance of ionic strengths and Z indicates the valence. The ICP can be used to interpret and characterize the ionic strength, valence, and DNA length effects on the counterion competition binding in a two-species system. Data from our previous investigations involving binding of Mg2+, Ca2+, and Co(NH3)63+ to lambda-DNA-HindIII fragments ranging from 2.0 to 23.1 kbp was used to investigate the applicability of ICP to describe counterion binding. It will be shown that the ICP parameter presents a prospective picture of the counterion competition binding to polyelectrolyte DNA under a specific ion environment condition.

摘要

在本文中,我们引入了一个重要参数——等竞争点(ICP),以表征双阳离子体系中与DNA的竞争结合。通过在曼宁反离子凝聚理论的两个联立方程中施加电荷中和分数等效条件θ1 = ZθZ,可以计算出ICP。每个ICP指的是单价阳离子中和的DNA上的电荷分数与多价阳离子中和的电荷分数相等时的特定多价浓度,对应于特定的离子强度条件。在固定离子强度下,无论高价阳离子是二价、三价还是四价,总的DNA电荷中和分数θICP都是相等的。离子强度对ICP的影响可以用一个半定量方程表示为ICPZa/ICPZb = (Ia/Ib)Z,其中Ia、Ib指离子强度的情况,Z表示价态。ICP可用于解释和表征离子强度、价态以及DNA长度对双物种体系中反离子竞争结合的影响。我们之前涉及Mg2+、Ca2+和Co(NH3)63+与2.0至23.1 kbp的λ-DNA-HindIII片段结合的研究数据被用于研究ICP描述反离子结合的适用性。结果将表明,ICP参数呈现了在特定离子环境条件下反离子与聚电解质DNA竞争结合的前景。

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