Korkhin Y, Kalb (Gilboa) A J, Peretz M, Bogin O, Burstein Y, Frolow F
Department of Structural Biology, The Weizmann Institute of Science, Rehovot, Israel.
Protein Sci. 1999 Jun;8(6):1241-9. doi: 10.1110/ps.8.6.1241.
Principles of protein thermostability have been studied by comparing structures of thermostable proteins with mesophilic counterparts that have a high degree of sequence identity. Two tetrameric NADP(H)-dependent alcohol dehydrogenases, one from Clostridium beijerinckii (CBADH) and the other from Thermoanaerobacter brockii (TBADH), having exceptionally high (75%) sequence identity, differ by 30 degrees in their melting temperatures. The crystal structures of CBADH and TBADH in their holo-enzyme form have been determined at a resolution of 2.05 and 2.5 A, respectively. Comparison of these two very similar structures (RMS difference in Calpha = 0.8 A) revealed several features that can account for the higher thermal stability of TBADH. These include additional ion pairs, "charged-neutral" hydrogen bonds, and prolines as well as improved stability of alpha-helices and tighter molecular packing. However, a deeper structural insight, based on the location of stabilizing elements, suggests that enhanced thermal stability of TBADH is due mainly to the strategic placement of structural determinants at positions that strengthen the interface between its subunits. This is also supported by mutational analysis of structural elements at critical locations. Thus, it is the reinforcement of the quaternary structure that is most likely to be a primary factor in preserving enzymatic activity of this oligomeric bacterial ADH at elevated temperatures.
通过比较具有高度序列同一性的嗜热蛋白质与嗜温对应物的结构,对蛋白质热稳定性原理进行了研究。两种四聚体NADP(H)依赖性醇脱氢酶,一种来自拜氏梭菌(CBADH),另一种来自布氏嗜热栖热菌(TBADH),它们的序列同一性极高(75%),但其解链温度相差30摄氏度。已分别以2.05 Å和2.5 Å的分辨率测定了全酶形式的CBADH和TBADH的晶体结构。对这两个非常相似的结构(α碳原子的均方根偏差为0.8 Å)进行比较,揭示了几个可以解释TBADH具有更高热稳定性的特征。这些特征包括额外的离子对、“带电-中性”氢键、脯氨酸,以及α螺旋稳定性的提高和分子堆积更紧密。然而,基于稳定元件位置的更深入结构洞察表明,TBADH热稳定性增强主要是由于结构决定因素在加强其亚基间界面的位置上的战略性排布。关键位置结构元件的突变分析也支持了这一点。因此,最有可能的是,四级结构的强化是在高温下保持这种寡聚细菌ADH酶活性的主要因素。