Tringali M D, Bert T M, Seyoum S, Bermingham E, Bartolacci D
Department of Environmental Protection, Florida Marine Research Institute, St. Petersburg, Florida 33701, USA.
Mol Phylogenet Evol. 1999 Oct;13(1):193-207. doi: 10.1006/mpev.1999.0624.
Phylogenetic relationships among the 12 recognized fish species in the New World genus Centropomus (Pisces, Centropomidae) were analyzed using allozyme electrophoresis and 618 bp of the mitochondrial DNA 16S ribosomal RNA (rRNA) gene. Molecular phylogenetic trees were generally consistent with previously published partial hypotheses based on morphological evidence. However, previously undefined sister group relationships between major species groups were resolved using molecular data, and phylogenetic hypotheses for Centropomus based on 16S rRNA sequences were better supported than were allozyme-based hypotheses. The high level of congruence among the trees inferred from the nuclear and mitochondrial characters provided a firm phylogenetic basis for analysis of ecological diversification and molecular evolution in the genus. Compared to basal Centropomus species, members of the most nested species group were significantly larger in body size and occupied a marine niche only peripherally utilized by their congeners. We also observed substitution rate heterogeneity among 16S rRNA lineages; in contrast to expectations based on "metabolic rate" and "generation interval" models, relative substitution rates were faster than expected for the group of large-bodied snooks. Using the Pliocene rise of the Central American isthmian marine barrier to calibrate rates of 16S ribosomal gene evolution in Centropomus, we found that the rates for the genus were similar to those reported for higher vertebrates. Analysis of the three sets of transisthmian geminate taxa in Centropomus indicated that two of the pairs were probably formed during the Pliocene rise of the isthmus while the third pair diverged several million years earlier.
利用等位酶电泳和线粒体DNA 16S核糖体RNA(rRNA)基因的618bp片段,分析了新世界属犬牙石首鱼属(鱼类,石首鱼科)中12种公认鱼类之间的系统发育关系。分子系统发育树总体上与先前基于形态学证据发表的部分假说一致。然而,主要物种组之间以前未明确的姐妹群关系通过分子数据得以解决,基于16S rRNA序列的犬牙石首鱼属系统发育假说比基于等位酶的假说得到了更好的支持。从核和线粒体特征推断出的树之间的高度一致性为该属的生态多样化和分子进化分析提供了坚实的系统发育基础。与基部犬牙石首鱼物种相比,最嵌套物种组的成员体型明显更大,仅在其同属物种很少利用的边缘区域占据海洋生态位。我们还观察到16S rRNA谱系之间的替代率异质性;与基于“代谢率”和“世代间隔”模型的预期相反,大型军曹鱼组的相对替代率比预期的要快。利用中美洲地峡海洋屏障上新世的上升来校准犬牙石首鱼属16S核糖体基因的进化速率,我们发现该属的速率与高等脊椎动物报道的速率相似。对犬牙石首鱼属中三组跨地峡双生分类群的分析表明,其中两对可能是在更新世地峡上升期间形成的,而第三对则在几百万年前就分化了。