• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

结构生物能量学与能量转导机制

Structural bioenergetics and energy transduction mechanisms.

作者信息

Rees D C, Howard J B

机构信息

Howard Hughes Medical Institute, Division of Chemistry and Chemical Engineering 147-75CH, California Institute of Technology, Pasadena, CA 91125, USA.

出版信息

J Mol Biol. 1999 Oct 22;293(2):343-50. doi: 10.1006/jmbi.1999.3005.

DOI:10.1006/jmbi.1999.3005
PMID:10550213
Abstract

Life depends on transduction processes that couple cellular metabolism to environmental energy sources such as light or reduced compounds. These primary energy sources must be efficiently converted into forms that can be utilized by cells for biosynthesis, motility, transport, regulation, and other metabolic functions. In recent years, there has been an explosive increase in the determination of structures for proteins mediating energy transduction processes. These developments provide the opportunity to evaluate the structural basis for the efficient coupling of two energetic processes, which defines the area of structural bioenergetics. Here, we present some general features of energy transduction processes, including arguments that effective coupling of two processes by a transduction protein occurs by way of conformational states that are common to the catalysis of each process. This is illustrated by examples from the nucleotide switch family of proteins, with emphasis on the nitrogenase system where ATP hydrolysis is coupled to an electron transfer reaction.

摘要

生命依赖于将细胞代谢与环境能量源(如光或还原型化合物)相耦合的转导过程。这些主要能量源必须被有效地转化为细胞可用于生物合成、运动、运输、调节及其他代谢功能的形式。近年来,介导能量转导过程的蛋白质结构测定数量呈爆发式增长。这些进展为评估两个能量过程高效耦合的结构基础提供了契机,这一领域即结构生物能学。在此,我们呈现能量转导过程的一些一般特征,包括这样的观点:转导蛋白对两个过程的有效耦合是通过每个过程催化所共有的构象状态实现的。这通过核苷酸开关蛋白家族的例子来说明,重点是将ATP水解与电子转移反应相耦合的固氮酶系统。

相似文献

1
Structural bioenergetics and energy transduction mechanisms.结构生物能量学与能量转导机制
J Mol Biol. 1999 Oct 22;293(2):343-50. doi: 10.1006/jmbi.1999.3005.
2
Protein-water electrostatics and principles of bioenergetics.蛋白质-水静电作用与生物能量学原理。
Phys Chem Chem Phys. 2010 Dec 21;12(47):15335-48. doi: 10.1039/c0cp01004a. Epub 2010 Oct 25.
3
D-Serine exposure resulted in gene expression changes indicative of activation of fibrogenic pathways and down-regulation of energy metabolism and oxidative stress response.D-丝氨酸暴露导致基因表达变化,提示促纤维化途径激活以及能量代谢和氧化应激反应下调。
Toxicology. 2008 Jan 14;243(1-2):177-92. doi: 10.1016/j.tox.2007.10.009. Epub 2007 Oct 23.
4
Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase with MgADP bound: a homologue of the nitrogenase Fe protein.球形红细菌光独立原叶绿素酸酯还原酶L蛋白与MgADP结合的晶体结构:固氮酶铁蛋白的同源物
Biochemistry. 2008 Dec 9;47(49):13004-15. doi: 10.1021/bi801058r.
5
Ensemble-based signatures of energy propagation in proteins: a new view of an old phenomenon.基于集成的蛋白质中能量传播特征:对一个旧现象的新视角。
Proteins. 2006 Mar 15;62(3):728-38. doi: 10.1002/prot.20749.
6
Molecular and thermodynamic bioenergetics.分子与热动力学生物能量学
Biochem Soc Trans. 2005 Aug;33(Pt 4):825-8. doi: 10.1042/BST0330825.
7
Thermodynamics of the mechanism of the nitrogenase reaction.固氮酶反应机制的热力学
Biophys Chem. 2005 Apr 22;114(2-3):115-20. doi: 10.1016/j.bpc.2004.11.009. Epub 2004 Dec 10.
8
The role of the putative catalytic base in the phosphoryl transfer reaction in a protein kinase: first-principles calculations.假定催化碱基在蛋白激酶磷酸转移反应中的作用:第一性原理计算
J Am Chem Soc. 2003 Aug 20;125(33):9926-7. doi: 10.1021/ja029618u.
9
Time-resolved absorption and emission show that the CP43' antenna ring of iron-stressed synechocystis sp. PCC6803 is efficiently coupled to the photosystem I reaction center core.时间分辨吸收和发射表明,铁胁迫的聚球藻属PCC6803的CP43'天线环与光系统I反应中心核心有效耦合。
Biochemistry. 2003 Apr 8;42(13):3893-903. doi: 10.1021/bi026987u.
10
From valleys to ridges: exploring the dynamic energy landscape of single membrane proteins.从山谷到山脊:探索单膜蛋白的动态能量景观
Chemphyschem. 2008 May 16;9(7):954-66. doi: 10.1002/cphc.200700662.

引用本文的文献

1
Sedimentation of large, soluble proteins up to 140 kDa for H-detected MAS NMR and C DNP NMR - practical aspects.大分子量、可溶性蛋白的沉淀可达 140 kDa,用于 H 检测 MAS NMR 和 C DNP NMR - 实际应用方面。
J Biomol NMR. 2024 Sep;78(3):179-192. doi: 10.1007/s10858-024-00444-9. Epub 2024 Jun 21.
2
Mechanical coupling in the nitrogenase complex.固氮酶复合物中的机械偶联。
PLoS Comput Biol. 2021 Mar 4;17(3):e1008719. doi: 10.1371/journal.pcbi.1008719. eCollection 2021 Mar.
3
Energy Transduction in Nitrogenase.氮酶中的能量转导。
Acc Chem Res. 2018 Sep 18;51(9):2179-2186. doi: 10.1021/acs.accounts.8b00112. Epub 2018 Aug 10.
4
High-Dimensional Mutant and Modular Thermodynamic Cycles, Molecular Switching, and Free Energy Transduction.高维突变和模块化热力学循环、分子开关和自由能转导。
Annu Rev Biophys. 2017 May 22;46:433-453. doi: 10.1146/annurev-biophys-070816-033811. Epub 2017 Mar 24.
5
In vitro high throughput screening, what next? Lessons from the screening for aurora kinase inhibitors.体外高通量筛选,下一步是什么?从极光激酶抑制剂筛选中得到的经验教训。
Biology (Basel). 2014 Feb 27;3(1):167-75. doi: 10.3390/biology3010167.
6
Electron transfer precedes ATP hydrolysis during nitrogenase catalysis.在氮酶催化过程中,电子转移先于 ATP 水解。
Proc Natl Acad Sci U S A. 2013 Oct 8;110(41):16414-9. doi: 10.1073/pnas.1311218110. Epub 2013 Sep 23.
7
Redox-dependent complex formation by an ATP-dependent activator of the corrinoid/iron-sulfur protein.依赖于氧化还原的钴胺素/铁硫蛋白 ATP 依赖性激活剂形成的复合物。
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5235-40. doi: 10.1073/pnas.1117126109. Epub 2012 Mar 19.
8
A master switch couples Mg²⁺-assisted catalysis to domain motion in B. stearothermophilus tryptophanyl-tRNA Synthetase.主开关将 Mg²⁺辅助催化与 B. stearothermophilus 色氨酰-tRNA 合成酶的结构域运动偶联。
Structure. 2012 Jan 11;20(1):128-38. doi: 10.1016/j.str.2011.10.020.
9
Gut pH as a limiting factor for digestive proteolysis in cultured juveniles of the gilthead sea bream (Sparus aurata).肠道 pH 值是影响养殖幼龄真鲷(Sparus aurata)消化蛋白水解的限制因素。
Fish Physiol Biochem. 2012 Jun;38(3):859-69. doi: 10.1007/s10695-011-9573-1. Epub 2011 Nov 16.
10
Insights into membrane association of Klebsiella pneumoniae NifL under nitrogen-fixing conditions from mutational analysis.从突变分析看固氮条件下肺炎克雷伯氏菌 NifL 的膜结合情况。
J Bacteriol. 2011 Feb;193(3):695-705. doi: 10.1128/JB.00775-10. Epub 2010 Nov 5.