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新种树木中华根瘤菌和新种科斯氏中华根瘤菌,从苏丹和肯尼亚的豆科树木中分离得到。

Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov., isolated from leguminous trees in Sudan and Kenya.

作者信息

Nick G, de Lajudie P, Eardly B D, Suomalainen S, Paulin L, Zhang X, Gillis M, Lindström K

机构信息

Department of Applied Chemistry and Microbiology, Viikki Biocentre, University of Helsinki, Finland.

出版信息

Int J Syst Bacteriol. 1999 Oct;49 Pt 4:1359-68. doi: 10.1099/00207713-49-4-1359.

Abstract

SDS-PAGE of total bacterial proteins was applied to the classification of 25 Sudanese and five Kenyan strains isolated from the root nodules of Acacia senegal and Prosopis chilensis. Twenty strains were also studied by multilocus enzyme electrophoresis (MLEE) and the whole 16S rRNA gene was sequenced from two strains representing the two major clusters. These results, together with the previously reported numerical taxonomy analysis, pulsed-field gel electrophoresis studies, DNA-DNA dot-blot hybridization, genomic fingerprinting using repetitive sequence-based PCR, DNA base composition analysis, DNA-DNA reassociation analysis, partial sequencing of the 16S rRNA gene and RFLP analysis of the amplified 16S rRNA gene, showed that all 30 strains belong to the genus Sinorhizobium. Two of the strains grouped with Sinorhizobium saheli and seven with Sinorhizobium terangae, while the rest did not cluster with any of the established species. The majority of the strains formed two phenotypically and genotypically distinct groups and we therefore propose that these strains should be classified as two new species, Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov.

摘要

对从塞内加尔金合欢和智利牧豆树根瘤中分离出的25株苏丹菌株和5株肯尼亚菌株,采用细菌总蛋白的SDS - PAGE进行分类。还通过多位点酶电泳(MLEE)对20株菌株进行了研究,并对代表两个主要聚类的两株菌株的16S rRNA全基因进行了测序。这些结果,连同先前报道的数值分类分析、脉冲场凝胶电泳研究、DNA - DNA斑点杂交、基于重复序列的PCR基因组指纹分析、DNA碱基组成分析、DNA - DNA重缔合分析、16S rRNA基因部分测序以及扩增的16S rRNA基因的RFLP分析,表明所有30株菌株均属于中华根瘤菌属。其中两株与萨赫利中华根瘤菌聚类,七株与特兰加中华根瘤菌聚类,其余菌株未与任何已确立的物种聚类。大多数菌株形成了两个表型和基因型不同的组,因此我们建议将这些菌株分类为两个新物种,即乔木中华根瘤菌(Sinorhizobium arboris sp. nov.)和科斯中华根瘤菌(Sinorhizobium kostiense sp. nov.)。

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