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趋化性原生动物微尺度斑块遭遇的建模。

Modelling of microscale patch encounter by chemotactic protozoa.

作者信息

Blackburn N, Fenchel T

机构信息

Marine Biological Laboratory, University of Copenhagen, Helsingør, Denmark.

出版信息

Protist. 1999 Oct;150(3):337-43. doi: 10.1016/S1434-4610(99)70034-9.

Abstract

A model of protozoan chemotaxis, based on the rate of change of chemoreceptor occupancy, was used to analyse the efficiency of chemotaxis in a variety of situations. Simulated swimming behaviour replicated patterns observed experimentally. These were classified into three forms of chemosensory behaviour; run-tumble, steered turning, and helical klinotaxis. All three could be simulated from a basic model of chemotaxis by modifying memory times and rotational velocities. In order to steer during helical klinotaxis, the cell must have a short term memory for responding to a signal within a fraction of the time period of the helix. Steered turning was identified as a form where cells react to negative changes in concentration by steering around the turn to swim back up the gradient. All 3 forms were quite effective for encountering targets within the response radius. A response to negative changes in concentration, experienced when the cell is moving away from a target, was found to be important in the absence of periodic changes in swimming direction. The frequency of patch encounter at a fixed density was calculated to be roughly proportional to swimming speed. On the basis of the model, cells are only able to sense point sources within a radius of a few mm. However, even a response radius of 1 mm is enough to increase encounter probability of otherwise minute targets by 2 orders of magnitude. The mean time for patch encounter was calculated to be an exponential function of the mean distance between patches. This results in a very sharp threshold at approximately 6 cm, above which they are not encountered by protozoa within time periods of several days.

摘要

基于化学感受器占据率变化率的原生动物趋化模型,被用于分析各种情况下趋化作用的效率。模拟的游动行为复制了实验观察到的模式。这些模式被分为三种化学感受行为形式:游动-翻滚、引导转向和螺旋斜趋性。通过修改记忆时间和旋转速度,所有这三种形式都可以从趋化的基本模型中模拟出来。为了在螺旋斜趋性过程中进行引导,细胞必须具有短期记忆,以便在螺旋周期的一小部分时间内对信号做出反应。引导转向被确定为一种细胞通过转向绕过转弯以逆着梯度向上游动来对浓度的负变化做出反应的形式。所有这三种形式在反应半径内遇到目标时都相当有效。当细胞远离目标时所经历的对浓度负变化的反应,发现在游动方向没有周期性变化的情况下很重要。计算得出在固定密度下斑块相遇的频率大致与游动速度成正比。基于该模型,细胞只能感知几毫米半径内的点源。然而,即使1毫米的反应半径也足以将原本微小目标的相遇概率提高两个数量级。计算得出斑块相遇的平均时间是斑块之间平均距离的指数函数。这导致在大约6厘米处有一个非常尖锐的阈值,高于该阈值,原生动物在几天的时间段内不会遇到它们。

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