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细菌域中精氨酸生物合成的进化:嗜冷性森田氏菌属菌株(弧菌科)的新型基因-酶关系及N-α-乙酰鸟氨酸酶的进化意义

Evolution of arginine biosynthesis in the bacterial domain: novel gene-enzyme relationships from psychrophilic Moritella strains (Vibrionaceae) and evolutionary significance of N-alpha-acetyl ornithinase.

作者信息

Xu Y, Liang Z, Legrain C, Rüger H J, Glansdorff N

机构信息

Laboratory for Genetics and Microbiology, Vrije Universiteit Brussel (VUB), and Department of Microbiology, Flanders Interuniversity Institute for Biotechnology, B-1070 Brussels, Belgium.

出版信息

J Bacteriol. 2000 Mar;182(6):1609-15. doi: 10.1128/JB.182.6.1609-1615.2000.

Abstract

In the arginine biosynthetic pathway of the vast majority of prokaryotes, the formation of ornithine is catalyzed by an enzyme transferring the acetyl group of N-alpha-acetylornithine to glutamate (ornithine acetyltransferase [OATase]) (argJ encoded). Only two exceptions had been reported-the Enterobacteriaceae and Myxococcus xanthus (members of the gamma and delta groups of the class Proteobacteria, respectively)-in which ornithine is produced from N-alpha-acetylornithine by a deacylase, acetylornithinase (AOase) (argE encoded). We have investigated the gene-enzyme relationship in the arginine regulons of two psychrophilic Moritella strains belonging to the Vibrionaceae, a family phylogenetically related to the Enterobacteriaceae. Most of the arg genes were found to be clustered in one continuous sequence divergently transcribed in two wings, argE and argCBFGH(A) ["H(A)" indicates that the argininosuccinase gene consists of a part homologous to known argH sequences and of a 3' extension able to complement an Escherichia coli mutant deficient in the argA gene, encoding N-alpha-acetylglutamate synthetase, the first enzyme committed to the pathway]. Phylogenetic evidence suggests that this new clustering pattern arose in an ancestor common to Vibrionaceae and Enterobacteriaceae, where OATase was lost and replaced by a deacylase. The AOase and ornithine carbamoyltransferase of these psychrophilic strains both display distinctly cold-adapted activity profiles, providing the first cold-active examples of such enzymes.

摘要

在绝大多数原核生物的精氨酸生物合成途径中,鸟氨酸的形成是由一种将N-α-乙酰鸟氨酸的乙酰基转移至谷氨酸的酶(鸟氨酸乙酰转移酶[OATase],由argJ编码)催化的。仅报道了两个例外情况,即肠杆菌科和黄色粘球菌(分别为变形菌纲γ和δ组的成员),在这两种菌中,鸟氨酸是由一种脱酰基酶——乙酰鸟氨酸酶(AOase,由argE编码)从N-α-乙酰鸟氨酸产生的。我们研究了属于弧菌科的两种嗜冷莫拉菌属菌株精氨酸调控子中的基因-酶关系,弧菌科在系统发育上与肠杆菌科相关。发现大多数精氨酸基因成簇存在于一个连续序列中,在两翼以不同方向转录,即argE和argCBFGH(A) ["H(A)"表示精氨琥珀酸酶基因由与已知argH序列同源的部分以及一个3'延伸部分组成,该延伸部分能够互补编码N-α-乙酰谷氨酸合成酶(该途径的第一个酶)的argA基因缺陷的大肠杆菌突变体]。系统发育证据表明,这种新的成簇模式出现在弧菌科和肠杆菌科的共同祖先中,在那里OATase丢失并被一种脱酰基酶取代。这些嗜冷菌株的AOase和鸟氨酸氨甲酰转移酶均表现出明显适应低温条件的活性特征,为这类酶提供了首个冷活性实例。

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本文引用的文献

1
TOPOGRAPHY OF COTRANSDUCIBLE ARGININE MUTATIONS IN ESCHERICHIA COLI K-12.
Genetics. 1965 Feb;51(2):167-79. doi: 10.1093/genetics/51.2.167.
4
Structure of the arginine repressor from Bacillus stearothermophilus.
Nat Struct Biol. 1999 May;6(5):427-32. doi: 10.1038/8229.
5
Changes in the microbial community in Japan Trench sediment from a depth of 6292 m during cultivation without decompression.
FEMS Microbiol Lett. 1999 Jan 1;170(1):271-9. doi: 10.1111/j.1574-6968.1999.tb13384.x.
6
Identification and characterization of the Myxococcus xanthus argE gene.
J Bacteriol. 1998 Dec;180(23):6412-4. doi: 10.1128/JB.180.23.6412-6414.1998.
8
The complete genome of the hyperthermophilic bacterium Aquifex aeolicus.
Nature. 1998 Mar 26;392(6674):353-8. doi: 10.1038/32831.
10
Genes and enzymes of the acetyl cycle of arginine biosynthesis in the extreme thermophilic bacterium Thermus thermophilus HB27.
Microbiology (Reading). 1998 Feb;144 ( Pt 2):479-492. doi: 10.1099/00221287-144-2-479.

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