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冰期后种群扩张对北美鸣禽系统地理学影响的遗传证据。

Genetic evidence for the effect of a postglacial population expansion on the phylogeography of a North American songbird.

作者信息

Milá B, Girman D J, Kimura M, Smith T B

机构信息

Center for Tropical Research, San Francisco State University, CA 94132, USA.

出版信息

Proc Biol Sci. 2000 May 22;267(1447):1033-40. doi: 10.1098/rspb.2000.1107.

DOI:10.1098/rspb.2000.1107
PMID:10874754
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1690639/
Abstract

Phylogeographical studies of Nearctic songbirds conducted to date have yielded unexpectedly low levels of genetic differentiation and weak phylogeographical structure in mitochondrial DNA lineages as compared with species studied in Neotropical areas. Factors leading to this pattern may include (i) gene flow, (ii) population expansions from bottlenecked populations, and (iii) selective sweeps. Here we provide evidence for the role played by Pleistocene postglacial population expansions on the phylogeography of MacGillivray's warbler (Oporornis tolmiei), a long-distance migratory bird. Samples from 12 breeding localities in the temperate USA were compared with those from two localities in north-eastern Mexico. The former showed evidence of a Late Pleistocene population expansion as indicated by low haplotype and nucleotide diversity, a star-like phylogeny of alleles, and a mismatch distribution indicating a sudden increase in effective population size. By contrast, the Mexican population showed high levels of genetic diversity and a mismatch distribution as expected for a population unaffected by sudden demographic change. Haplotypes from the two regions formed two distinct phylogroups which separated roughly one million years ago according to a conventional molecular clock for songbirds. This study provides support for the Pleistocene expansion hypothesis in MacGillivray's warbler and suggests that postglacial expansion of bottlenecked populations is responsible for the lack of variation and structure reported for most North American songbird species.

摘要

与在新热带地区研究的物种相比,迄今对新北区鸣禽进行的系统地理学研究显示,线粒体DNA谱系中的遗传分化水平出乎意料地低,系统地理结构也很微弱。导致这种模式的因素可能包括:(i)基因流动;(ii)瓶颈种群的种群扩张;(iii)选择性清除。在这里,我们提供证据证明更新世冰期后种群扩张对麦吉利夫雷氏林莺(Oporornis tolmiei)——一种长距离候鸟——的系统地理学所起的作用。将来自美国温带地区12个繁殖地的样本与来自墨西哥东北部两个地点的样本进行了比较。前者显示出晚更新世种群扩张的证据,表现为单倍型和核苷酸多样性低、等位基因呈星状系统发育,以及失配分布表明有效种群大小突然增加。相比之下,墨西哥种群显示出高水平的遗传多样性和失配分布,这是未受突然的人口变化影响的种群所预期的。根据传统的鸣禽分子钟,来自这两个地区的单倍型形成了两个不同的系统群,它们大约在一百万年前分开。这项研究为麦吉利夫雷氏林莺的更新世扩张假说提供了支持,并表明瓶颈种群的冰期后扩张是导致大多数北美鸣禽物种缺乏变异和结构的原因。

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