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β-螺旋抗冻蛋白的表面羟基和水对冰结构的模拟

Mimicry of ice structure by surface hydroxyls and water of a beta-helix antifreeze protein.

作者信息

Liou Y C, Tocilj A, Davies P L, Jia Z

机构信息

Department of Biochemistry, Queen's University, Kingston, Ontario, Canada.

出版信息

Nature. 2000 Jul 20;406(6793):322-4. doi: 10.1038/35018604.

Abstract

Insect antifreeze proteins (AFP) are much more effective than fish AFPs at depressing solution freezing points by ice-growth inhibition. AFP from the beetle Tenebrio molitor is a small protein (8.4 kDa) composed of tandem 12-residue repeats (TCTxSxxCxxAx). Here we report its 1.4-A resolution crystal structure, showing that this repetitive sequence translates into an exceptionally regular beta-helix. Not only are the 12-amino-acid loops almost identical in the backbone, but also the conserved side chains are positioned in essentially identical orientations, making this AFP perhaps the most regular protein structure yet observed. The protein has almost no hydrophobic core but is stabilized by numerous disulphide and hydrogen bonds. On the conserved side of the protein, threonine-cysteine-threonine motifs are arrayed to form a flat beta-sheet, the putative ice-binding surface. The threonine side chains have exactly the same rotameric conformation and the spacing between OH groups is a near-perfect match to the ice lattice. Together with tightly bound co-planar external water, three ranks of oxygen atoms form a two-dimensional array, mimicking an ice section.

摘要

昆虫抗冻蛋白(AFP)在通过抑制冰晶生长来降低溶液冰点方面比鱼类AFP有效得多。来自黄粉虫的AFP是一种小蛋白(8.4 kDa),由串联的12个残基重复序列(TCTxSxxCxxAx)组成。在此我们报道其分辨率为1.4 Å的晶体结构,表明这种重复序列转化为一种异常规则的β-螺旋。不仅12个氨基酸的环在主链上几乎相同,而且保守的侧链也以基本相同的方向定位,使得这种AFP可能是迄今观察到的最规则的蛋白质结构。该蛋白几乎没有疏水核心,但通过众多二硫键和氢键得以稳定。在蛋白的保守侧,苏氨酸-半胱氨酸-苏氨酸基序排列形成一个扁平的β-折叠片,即假定的冰结合表面。苏氨酸侧链具有完全相同的旋转异构体构象,且羟基之间的间距与冰晶格几乎完美匹配。与紧密结合的共平面外部水一起,三排氧原子形成一个二维阵列,模拟冰的截面。

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