Schuck P, Rossmanith P
Molecular Interactions Resource, Bioengineering and Physical Science Program, ORS, National Institutes of Health, Bethesda, Maryland 20892, USA.
Biopolymers. 2000 Oct 15;54(5):328-41. doi: 10.1002/1097-0282(20001015)54:5<328::AID-BIP40>3.0.CO;2-P.
A new method is presented for the calculation of apparent sedimentation coefficient distributions g*(s) for the size-distribution analysis of polymers in sedimentation velocity experiments. Direct linear least-squares boundary modeling by a superposition of sedimentation profiles of ideal nondiffusing particles is employed. It can be combined with algebraic noise decomposition techniques for the application to interference optical ultracentrifuge data at low loading concentrations with significant systematic noise components. Because of the use of direct boundary modeling, residuals are available for assessment of the quality of the fits and the consistency of the g*(s) distribution with the experimental data. The method can be combined with regularization techniques based on F statistics, such as used in the program CONTIN, or alternatively, the increment of s values can be adjusted empirically. The method is simple, has advantageous statistical properties, and reveals precise sedimentation coefficients. The new least-squares ls-g*(s) exhibits a very high robustness and resolution if data acquired over a large time interval are analyzed. This can result in a high resolution for large particles, and for samples with a high degree of heterogeneity. Because the method does not require a high frequency of scans, it can also be easily used in experiments with the absorbance optical scanning system. Published 2000 John Wiley & Sons, Inc.
本文提出了一种新方法,用于计算沉降速度实验中聚合物尺寸分布分析的表观沉降系数分布g*(s)。采用理想非扩散颗粒沉降曲线叠加的直接线性最小二乘边界建模。它可以与代数噪声分解技术相结合,应用于低加载浓度且具有显著系统噪声成分的干涉光学超速离心机数据。由于使用了直接边界建模,可以得到残差,用于评估拟合质量以及g*(s)分布与实验数据的一致性。该方法可以与基于F统计量的正则化技术相结合,如程序CONTIN中所使用的技术,或者也可以凭经验调整s值的增量。该方法简单,具有有利的统计特性,并且能揭示精确的沉降系数。如果分析在较大时间间隔内采集的数据,新的最小二乘ls-g*(s)表现出非常高的稳健性和分辨率。这对于大颗粒以及高度异质性的样品可以产生高分辨率。由于该方法不需要高扫描频率,则也可以很容易地用于吸光光学扫描系统的实验。2000年出版 约翰威立父子出版公司