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鲁氏接合酵母和嗜高渗毕赤酵母特定基因组区域的组织:与酿酒酵母的比较。

Organization of specific genomic regions of Zygosaccharomyces rouxii and Pichia sorbitophila: comparison with Saccharomyces cerevisiae.

作者信息

Sychrova H, Braun V, Potier S, Souciet J L

机构信息

Department of Membrane Transport, Institute of Physiology CzAcadSci, Videnska 1083, 142 20 Prague 4, Czech Republic.

出版信息

Yeast. 2000 Nov;16(15):1377-85. doi: 10.1002/1097-0061(200011)16:15<1377::AID-YEA637>3.0.CO;2-0.

Abstract

The genomes of Zygosaccharomyces rouxii and Pichia sorbitophila were partially explored. The genome of Z. rouxii CBS 732 consists of seven chromosomes with an approximate size of 1.0-2.75 Mb, 12.8 Mb in total. Five of the chromosomes were labelled with specific probes. Three Z. rouxii genomic DNA fragments were sequenced; all 10 ORFs found were without introns and they have homologues in S. cerevisiae. Gene order comparison revealed that the organization is partially conserved in both species. The genome of P. sorbitophila CBS 7064 consists of seven chromosomes with an approximate size of 1.0-2.9 Mb, 13.9 Mb in total. Three of the chromosomes were labelled with specific probes. The sequencing of a 5.2 kb genomic DNA fragment revealed three ORFs, but no conservation of their organization was found, although all of them have their respective homologues in S. cerevisiae. According to our results, the presence of two overlapping ORFs in S. cerevisiae (YJL107c-YJL108c) could be interpreted as the result of a frameshift mutation.

摘要

鲁氏接合酵母和嗜高渗毕赤酵母的基因组已得到部分研究。鲁氏接合酵母CBS 732的基因组由七条染色体组成,大小约为1.0 - 2.75 Mb,总计12.8 Mb。其中五条染色体用特异性探针进行了标记。对三个鲁氏接合酵母基因组DNA片段进行了测序;所发现的全部10个开放阅读框均无内含子,且在酿酒酵母中有同源物。基因顺序比较显示,这两个物种的基因组组织部分保守。嗜高渗毕赤酵母CBS 7064的基因组由七条染色体组成,大小约为1.0 - 2.9 Mb,总计13.9 Mb。其中三条染色体用特异性探针进行了标记。对一个5.2 kb基因组DNA片段的测序揭示了三个开放阅读框,尽管它们在酿酒酵母中均有各自的同源物,但未发现其组织上的保守性。根据我们的结果,酿酒酵母中两个重叠开放阅读框(YJL107c - YJL108c)的存在可解释为移码突变的结果。

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