Zhang Y, Yuan F, Xin H, Wu X, Rajpal D K, Yang D, Wang Z
Graduate Center for Toxicology and Department of Chemistry, University of Kentucky, Lexington, KY 40536, USA.
Nucleic Acids Res. 2000 Nov 1;28(21):4147-56. doi: 10.1093/nar/28.21.4147.
Escherichia coli DNA polymerase IV encoded by the dinB gene is involved in untargeted mutagenesis. Its human homologue is DNA polymerase kappa (Polkappa) encoded by the DINB1 gene. Our recent studies have indicated that human Polkappa is capable of both error-free and error-prone translesion DNA synthesis in vitro. However, it is not known whether human Polkappa also plays a role in untargeted mutagenesis. To examine this possibility, we have measured the fidelity of human Polkappa during DNA synthesis from undamaged templates. Using kinetic measurements of nucleotide incorporations and a fidelity assay with gapped M13mp2 DNA, we show that human Polkappa synthesizes DNA with extraordinarily low fidelity. At the lacZalpha target gene, human Polkappa made on average one error for every 200 nucleotides synthesized, with a predominant T-->G transversion mutation at a rate of 1/147. The overall error rate of human Polkappa is 1.7-fold lower than human Poleta, but 33-fold higher than human Polbeta, a DNA polymerase with very low fidelity. Thus, human Polkappa is one of the most inaccurate DNA polymerases known. These results support a role for human Polkappa in untargeted mutagenesis surrounding a DNA lesion and in DNA regions without damage.
由dinB基因编码的大肠杆菌DNA聚合酶IV参与非靶向诱变。其人类同源物是由DINB1基因编码的DNA聚合酶κ(Polκ)。我们最近的研究表明,人类Polκ在体外既能进行无差错的也能进行易出错的跨损伤DNA合成。然而,尚不清楚人类Polκ是否也在非靶向诱变中发挥作用。为了检验这种可能性,我们测量了人类Polκ在从未受损模板进行DNA合成过程中的保真度。通过对核苷酸掺入的动力学测量以及使用带缺口的M13mp2 DNA进行保真度测定,我们发现人类Polκ合成DNA时的保真度极低。在lacZα靶基因处,人类Polκ每合成200个核苷酸平均会产生一个错误,主要的T→G颠换突变率为1/147。人类Polκ的总体错误率比人类Polη低1.7倍,但比保真度非常低的DNA聚合酶人类Polβ高33倍。因此,人类Polκ是已知的最不准确的DNA聚合酶之一。这些结果支持了人类Polκ在围绕DNA损伤处的非靶向诱变以及在未受损的DNA区域中发挥作用。