Wang G, Louis J M, Sondej M, Seok Y J, Peterkofsky A, Clore G M
Laboratory of Chemical Physics, Building 5, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0510, USA.
EMBO J. 2000 Nov 1;19(21):5635-49. doi: 10.1093/emboj/19.21.5635.
The solution structure of the second protein-protein complex of the Escherichia coli phosphoenolpyruvate: sugar phosphotransferase system, that between histidine-containing phosphocarrier protein (HPr) and glucose-specific enzyme IIA(Glucose) (IIA(Glc)), has been determined by NMR spectroscopy, including the use of dipolar couplings to provide long-range orientational information and newly developed rigid body minimization and constrained/restrained simulated annealing methods. A protruding convex surface on HPr interacts with a complementary concave depression on IIA(Glc). Both binding surfaces comprise a central hydrophobic core region surrounded by a ring of polar and charged residues, positive for HPr and negative for IIA(Glc). Formation of the unphosphorylated complex, as well as the phosphorylated transition state, involves little or no change in the protein backbones, but there are conformational rearrangements of the interfacial side chains. Both HPr and IIA(Glc) recognize a variety of structurally diverse proteins. Comparisons with the structures of the enzyme I-HPr and IIA(Glc)-glycerol kinase complexes reveal how similar binding surfaces can be formed with underlying backbone scaffolds that are structurally dissimilar and highlight the role of redundancy and side chain conformational plasticity.
糖磷酸转移酶系统中第二个蛋白质 - 蛋白质复合物,即含组氨酸的磷酸载体蛋白(HPr)与葡萄糖特异性酶IIA(葡萄糖)(IIA(Glc))之间的溶液结构,已通过核磁共振光谱法确定,包括使用偶极耦合来提供远程取向信息以及新开发的刚体最小化和约束/受限模拟退火方法。HPr上的一个突出凸面与IIA(Glc)上的互补凹坑相互作用。两个结合表面都包含一个由极性和带电残基环包围的中央疏水核心区域,HPr上为正电荷,IIA(Glc)上为负电荷。未磷酸化复合物以及磷酸化过渡态的形成涉及蛋白质主链几乎没有或没有变化,但界面侧链存在构象重排。HPr和IIA(Glc)都能识别多种结构不同的蛋白质。与酶I - HPr和IIA(Glc) - 甘油激酶复合物的结构比较揭示了如何利用结构不同的基础主链支架形成相似的结合表面,并突出了冗余和侧链构象可塑性的作用。