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抗微生物脂肽iturin A2类似物与碱金属离子的相互作用。

The interaction of analogues of the antimicrobial lipopeptide, iturin A2, with alkali metal ions.

作者信息

Rautenbach M, Swart P, van der Merwe M J

机构信息

Departmnent of Biochemistry, University of Stellenbosch, Matieland, South Africa.

出版信息

Bioorg Med Chem. 2000 Nov;8(11):2539-48. doi: 10.1016/s0968-0896(00)00186-3.

Abstract

Electrospray mass spectrometry was employed as a tool in this first study on the molecular interaction between the alkali metal ions and antifungal lipopeptide iturin A, and some analogues. Cationisation by sodium and signal intensity of lipopeptide species depended on sodium concentration, but was independent of sample solvent, carrier solvent polarity and sample pH between 4 and 11. 8-Beta, a linear analogue of iturin A2 (8-Beta; beta-aminotetradecanoyl-NYNQPNS), and its shorter linear lipopeptide analogues, associated either one or two alkali metal cations, while the N-->C cyclic peptides associated with only one cation. The chirality of the beta-NC14 residue had a limited influence on the cationisation. It was observed that 8-Beta contained at least four interaction sites for a cation of which two, the C-terminal carboxylate and the side-chain of tyrosine, can take part in ionic interaction with a cation. It is proposed that the remaining two interaction centres of alkali metal ions are within the two type II beta-turns found in conformation of natural iturin A. This was corroborated by the diminished capacity of the shorter peptides, in which one of the beta-turns was eliminated to bind a second larger cation. All the lipopeptides showed the same order of alkali metal ion selectivity: Na+ > K+ > Rb+. These results indicated a size limitation in the interaction cavity or cavities. The absence of, or observation of only low abundance, di-cationised complexes of cyclic peptides the indicated association of the cation in the interior of the peptide ring. It is thus hypothesised that alkali metal ions can bind in one of the two beta-turns in the natural iturin A molecule.

摘要

在关于碱金属离子与抗真菌脂肽伊枯草菌素A及其一些类似物之间分子相互作用的首次研究中,采用了电喷雾质谱法作为工具。脂肽物种的钠阳离子化和信号强度取决于钠浓度,但与样品溶剂、载体溶剂极性以及4至11之间的样品pH无关。伊枯草菌素A2的线性类似物8-β(8-β;β-氨基十四烷酰-NYNQPNS)及其较短的线性脂肽类似物可结合一个或两个碱金属阳离子,而N→C环肽仅结合一个阳离子。β-NC14残基的手性对阳离子化的影响有限。据观察,8-β含有至少四个阳离子相互作用位点,其中两个,即C端羧酸盐和酪氨酸侧链,可与阳离子发生离子相互作用。有人提出,碱金属离子的其余两个相互作用中心位于天然伊枯草菌素A构象中发现的两个II型β-转角内。较短的肽段结合第二个较大阳离子的能力减弱,这证实了这一点,在较短的肽段中,其中一个β-转角被消除。所有脂肽均表现出相同的碱金属离子选择性顺序:Na+>K+>Rb+。这些结果表明相互作用腔存在尺寸限制。环状肽的双阳离子化复合物不存在或仅观察到低丰度,这表明阳离子在肽环内部缔合。因此,有人假设碱金属离子可结合在天然伊枯草菌素A分子的两个β-转角之一中。

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