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人结膜上皮中活性基因的表达谱。

An expression profile of active genes in human conjunctival epithelium.

作者信息

Dota A, Nishida K, Adachi W, Nakamura T, Koizumi N, Kawamoto S, Okubo K, Kinoshita S

机构信息

Department of Ophthalmology, Kyoto Prefectural University of Medicine, Kawaramachi Hirokoji, Kamigyo-ku, Kyoto 602-0841, Japan.

出版信息

Exp Eye Res. 2001 Mar;72(3):235-41. doi: 10.1006/exer.2000.0946.

DOI:10.1006/exer.2000.0946
PMID:11180972
Abstract

The purpose of this study was to describe the quantitatively and qualitatively genes expressed in in vivo human conjunctival epithelium. A cDNA library was created from human conjunctival epithelial cells obtained from 38 normal eyes by brush cytology. Poly A(+)RNA isolated from these cells was used as a template for cDNA synthesis by the vector-priming method. A 3'-directed cDNA library consisting of the cDNA moiety covering the poly A(+)RNA tail through the nearest Mbo I site was constructed and transformed into Escherichia coli. Inserts in 933 randomly chosen clones were sequenced. The resulting sequences were compared to determine frequency of appearance in the library, and to establish an expression profile of genes in the conjunctival epithelium. The sequences were sent to GenBank for gene identification. The result was an expression profile of active genes reflecting their relative abundance in the conjunctival epithelial mRNA population. The expression profile of human conjunctival epithelium showed that the most abundant gene transcript in human conjunctival epithelium was that for cytokeratin 13. Altogether 102 genes were found to be very active, including beta-2 microglobulin, lipocortin I and insulin-like growth factor binding protein-3. The gene expression profile of the conjunctival epithelium reflects the unique properties and functions of this tissue. Comparison of this expression profile with that obtained from corneal epithelium discloses clear differences and helps us better understand the physiology and pathophysiology of the ocular surface in humans.

摘要

本研究的目的是描述体内人结膜上皮中定量和定性表达的基因。通过刷片细胞学从38只正常眼睛获取人结膜上皮细胞,构建了一个cDNA文库。从这些细胞中分离的聚腺苷酸(+)RNA用作载体引发法合成cDNA的模板。构建了一个3'定向cDNA文库,其由覆盖聚腺苷酸(+)RNA尾部直至最近的Mbo I位点的cDNA部分组成,并转化到大肠杆菌中。对933个随机选择的克隆中的插入片段进行测序。比较所得序列以确定文库中出现的频率,并建立结膜上皮中基因的表达谱。将这些序列发送到GenBank进行基因鉴定。结果是反映了它们在结膜上皮mRNA群体中相对丰度的活性基因表达谱。人结膜上皮的表达谱表明,人结膜上皮中最丰富的基因转录本是细胞角蛋白13的转录本。总共发现102个基因非常活跃,包括β-2微球蛋白、脂皮质蛋白I和胰岛素样生长因子结合蛋白-3。结膜上皮的基因表达谱反映了该组织的独特特性和功能。将该表达谱与从角膜上皮获得的表达谱进行比较,揭示了明显的差异,并有助于我们更好地理解人类眼表的生理学和病理生理学。

相似文献

1
An expression profile of active genes in human conjunctival epithelium.人结膜上皮中活性基因的表达谱。
Exp Eye Res. 2001 Mar;72(3):235-41. doi: 10.1006/exer.2000.0946.
2
A gene expression profile of human corneal epithelium and the isolation of human keratin 12 cDNA.人角膜上皮的基因表达谱及人角蛋白12 cDNA的分离
Invest Ophthalmol Vis Sci. 1996 Aug;37(9):1800-9.
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An expression profile of genes in human retina and isolation of a complementary DNA for a novel rod photoreceptor protein.人类视网膜中基因的表达谱及一种新型视杆光感受器蛋白互补DNA的分离
Invest Ophthalmol Vis Sci. 1997 Nov;38(12):2576-85.
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Construction of human corneal endothelial cDNA library and identification of novel active genes.
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cDNA from human ocular ciliary epithelium homologous to beta ig-h3 is preferentially expressed as an extracellular protein in the corneal epithelium.与人βig-h3同源的人眼睫状体上皮cDNA在角膜上皮中优先作为一种细胞外蛋白表达。
J Cell Physiol. 1994 Sep;160(3):511-21. doi: 10.1002/jcp.1041600314.
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Clusters of corneal epithelial cells reside ectopically in human conjunctival epithelium.角膜上皮细胞簇异位存在于人类结膜上皮中。
Invest Ophthalmol Vis Sci. 2006 Apr;47(4):1359-67. doi: 10.1167/iovs.05-1084.
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[Normal human conjunctival epithelium expresses MUC13, MUC15, MUC16 and MUC17 mucin genes].正常人类结膜上皮表达MUC13、MUC15、MUC16和MUC17粘蛋白基因。
Arch Soc Esp Oftalmol. 2003 Jul;78(7):375-81.
8
Micro serial analysis of gene expression in normal human choroid and retinal pigment epithelial transcriptomes.正常人脉络膜和视网膜色素上皮转录组中的基因表达微序列分析。
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Multi-layered culture of primary human conjunctival epithelial cells producing MUC5AC.产生MUC5AC的原代人结膜上皮细胞的多层培养。
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Monitoring cell physiology by expression profiles and discovering cell type-specific genes by compiled expression profiles.通过表达谱监测细胞生理学,并通过汇编的表达谱发现细胞类型特异性基因。
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2
Effect of fluoxetine on the MAPK-ERK1/2 signaling pathway and expression of associated factors in human conjunctival epithelial cells in culture.氟西汀对体外培养的人结膜上皮细胞中MAPK-ERK1/2信号通路及相关因子表达的影响。
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Hyaluronan production and hyaluronan synthase expression in three human conjunctiva-derived cell strains.
三种人结膜衍生细胞株中透明质酸的产生和透明质酸合酶的表达。
Jpn J Ophthalmol. 2011 Nov;55(6):660-9. doi: 10.1007/s10384-011-0072-9. Epub 2011 Aug 24.
4
Keratin 13 is a more specific marker of conjunctival epithelium than keratin 19.角蛋白13是比角蛋白19更具特异性的结膜上皮标志物。
Mol Vis. 2011;17:1652-61. Epub 2011 Jun 18.
5
[Molecular aspects of alterations in normal normal conjunctival epithelium. Role of apoptosis-associated genes].[正常结膜上皮细胞改变的分子层面。凋亡相关基因的作用] (注:原文中“normal normal”表述有误,可能是“normal”的重复,这里按正常理解翻译)
Ophthalmologe. 2005 Feb;102(2):133-9. doi: 10.1007/s00347-004-1089-y.