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DNA聚合酶μ,一种潜在的高突变酶?

DNA polymerase mu, a candidate hypermutase?

作者信息

Ruiz J F, Domínguez O, Laín de Lera T, Garcia-Díaz M, Bernad A, Blanco L

机构信息

Centro de Biología Molecular Severo Ochoa (CSIC-UAM), Universidad Autónoma, Madrid, Spain.

出版信息

Philos Trans R Soc Lond B Biol Sci. 2001 Jan 29;356(1405):99-109. doi: 10.1098/rstb.2000.0754.

DOI:10.1098/rstb.2000.0754
PMID:11205337
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1087697/
Abstract

A novel DNA polymerase (Pol mu) has been recently identified in human cells. The amino-acid sequence of Pol mu is 42% identical to that of terminal deoxynucleotidyl transferase (TdT), a DNA-independent DNA polymerase that contributes to antigen-receptor diversity. In this paper we review the evidence supporting the role of Pol mu in somatic hypermutation of immunoglobulin genes, a T-dependent process that selectively occurs at germinal centres: (i) preferential expression in secondary lymphoid organs; (ii) expression associated to developing germinal centres; and (iii) very low base discrimination during DNA-dependent DNA polymerization by Pol mu, a mutator phenotype enormously accentuated by the presence of activating Mn2+ ions. Moreover, its similarity to TdT, together with extrapolation to the crystal structure of DNA polymerase beta complexed (Pol beta) with DNA, allows us to discuss the structural basis for the unprecedented error proneness of Pol mu, and to predict that Pol mu is structurally well suited to participate also in DNA end-filling steps occurring both during V(D)J recombination and repair of DNA double-strand breaks that are processed by non-homologous end-joining.

摘要

最近在人类细胞中发现了一种新型DNA聚合酶(Pol mu)。Pol mu的氨基酸序列与末端脱氧核苷酸转移酶(TdT)有42%的同源性,TdT是一种不依赖DNA的DNA聚合酶,对抗原受体多样性有贡献。在本文中,我们综述了支持Pol mu在免疫球蛋白基因体细胞超突变中作用的证据,体细胞超突变是一种依赖T细胞的过程,选择性地发生在生发中心:(i)在二级淋巴器官中优先表达;(ii)与生发中心发育相关的表达;(iii)Pol mu在依赖DNA的DNA聚合过程中碱基识别能力极低,激活的Mn2+离子的存在极大地加剧了这种诱变表型。此外,它与TdT的相似性,以及对与DNA复合的DNA聚合酶β(Pol beta)晶体结构的推断,使我们能够讨论Pol mu前所未有的易错性的结构基础,并预测Pol mu在结构上也非常适合参与V(D)J重组和非同源末端连接处理的DNA双链断裂修复过程中发生的DNA末端填充步骤。

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DNA polymerase mu, a candidate hypermutase?DNA聚合酶μ,一种潜在的高突变酶?
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本文引用的文献

1
Follicular lymphomas' BCL-2/IgH junctions contain templated nucleotide insertions: novel insights into the mechanism of t(14;18) translocation.滤泡性淋巴瘤的BCL-2/IgH连接区含有模板化核苷酸插入:对t(14;18)易位机制的新见解。
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The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance.DNA聚合酶的多面性:诱变及避免突变的策略
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DNA double strand break repair in mammalian cells.哺乳动物细胞中的DNA双链断裂修复
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DNA polymerase mu (Pol mu), homologous to TdT, could act as a DNA mutator in eukaryotic cells.与末端脱氧核苷酸转移酶(TdT)同源的DNA聚合酶μ(Pol μ)可在真核细胞中充当DNA诱变剂。
EMBO J. 2000 Apr 3;19(7):1731-42. doi: 10.1093/emboj/19.7.1731.
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Eukaryotic DNA polymerases, a growing family.真核生物DNA聚合酶,一个不断壮大的家族。
Trends Biochem Sci. 2000 Mar;25(3):143-7. doi: 10.1016/s0968-0004(99)01523-6.
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Nonhomologous DNA end joining in cell-free systems.
Eur J Biochem. 1999 Nov;265(3):849-61. doi: 10.1046/j.1432-1327.1999.00805.x.
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Novel DNA polymerases offer clues to the molecular basis of mutagenesis.新型DNA聚合酶为诱变的分子基础提供了线索。
Cell. 1999 Aug 20;98(4):413-6. doi: 10.1016/s0092-8674(00)81970-4.
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A DNA damage repair mechanism is involved in the origin of chromosomal translocations t(4;11) in primary leukemic cells.一种DNA损伤修复机制与原发性白血病细胞中染色体易位t(4;11)的起源有关。
Oncogene. 1999 Aug 19;18(33):4663-71. doi: 10.1038/sj.onc.1202842.
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Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathway.酵母非同源末端连接过程中DNA末端的高效处理。依赖DNA聚合酶β(Pol4)途径的证据。
J Biol Chem. 1999 Aug 13;274(33):23599-609. doi: 10.1074/jbc.274.33.23599.
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Purification, characterization, and crystallization of the distal BRCT domain of the human XRCC1 DNA repair protein.人类XRCC1 DNA修复蛋白远端BRCT结构域的纯化、表征及结晶
Protein Expr Purif. 1999 Jul;16(2):236-42. doi: 10.1006/prep.1999.1070.