• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人类 Polμ 和 Polλ 进行 DNA 末端桥连需要 8 kDa 结构域的特定 N 末端延伸。

A specific N-terminal extension of the 8 kDa domain is required for DNA end-bridging by human Polμ and Polλ.

机构信息

Centro de Biologia Molecular Severo Ochoa (CSIC-UAM), 28049 Madrid, Spain.

出版信息

Nucleic Acids Res. 2013 Oct;41(19):9105-16. doi: 10.1093/nar/gkt681. Epub 2013 Aug 8.

DOI:10.1093/nar/gkt681
PMID:23935073
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3799444/
Abstract

Human DNA polymerases mu (Polµ) and lambda (Polλ) are X family members involved in the repair of double-strand breaks in DNA during non-homologous end joining. Crucial abilities of these enzymes include bridging of the two 3' single-stranded overhangs and trans-polymerization using one 3' end as primer and the other as template, to minimize sequence loss. In this context, we have studied the importance of a previously uncharacterised sequence ('brooch'), located at the N-terminal boundary of the Polß-like polymerase core, and formed by Tyr(141), Ala(142), Cys(143), Gln(144) and Arg(145) in Polµ, and by Trp(239), Val(240), Cys(241), Ala(242) and Gln(243) in Polλ. The brooch is potentially implicated in the maintenance of a closed conformation throughout the catalytic cycle, and our studies indicate that it could be a target of Cdk phosphorylation in Polµ. The brooch is irrelevant for 1 nt gap filling, but of specific importance during end joining: single mutations in the conserved residues reduced the formation of two ended synapses and strongly diminished the ability of Polµ and polymerase lambda to perform non-homologous end joining reactions in vitro.

摘要

人类 DNA 聚合酶 μ(Polμ)和 λ(Polλ)是 X 家族成员,参与非同源末端连接过程中双链 DNA 断裂的修复。这些酶的关键能力包括桥接两个 3'单链突出端,以及使用一个 3'末端作为引物和另一个作为模板进行反式聚合,以最小化序列丢失。在这种情况下,我们研究了位于 Polβ样聚合酶核心 N 端边界的一个以前未被表征的序列(“胸针”)的重要性,该序列由 Polμ 中的 Tyr(141)、Ala(142)、Cys(143)、Gln(144)和 Arg(145)组成,由 Polλ 中的 Trp(239)、Val(240)、Cys(241)、Ala(242)和 Gln(243)组成。胸针可能参与维持整个催化循环中的封闭构象,我们的研究表明,它可能是 Polμ 中 Cdk 磷酸化的靶标。胸针与 1 nt 缺口填充无关,但在末端连接中具有特异性重要性:保守残基的单点突变降低了双端突触的形成,并强烈降低了 Polμ 和聚合酶 λ 在体外进行非同源末端连接反应的能力。

相似文献

1
A specific N-terminal extension of the 8 kDa domain is required for DNA end-bridging by human Polμ and Polλ.人类 Polμ 和 Polλ 进行 DNA 末端桥连需要 8 kDa 结构域的特定 N 末端延伸。
Nucleic Acids Res. 2013 Oct;41(19):9105-16. doi: 10.1093/nar/gkt681. Epub 2013 Aug 8.
2
DNA polymerase λ Loop1 variant yields unexpected gain-of-function capabilities in nonhomologous end-joining.DNA 聚合酶 λ Loop1 变体在非同源末端连接中产生了意想不到的功能增益能力。
DNA Repair (Amst). 2024 Apr;136:103645. doi: 10.1016/j.dnarep.2024.103645. Epub 2024 Feb 3.
3
DNA expansions generated by human Polμ on iterative sequences.人类 Polμ 在重复序列上产生的 DNA 扩展。
Nucleic Acids Res. 2013 Jan 7;41(1):253-63. doi: 10.1093/nar/gks1054. Epub 2012 Nov 9.
4
DNA-binding determinants promoting NHEJ by human Polμ.促进人源 Polμ 进行非同源末端连接(NHEJ)的 DNA 结合决定因素。
Nucleic Acids Res. 2012 Dec;40(22):11389-403. doi: 10.1093/nar/gks896. Epub 2012 Oct 2.
5
Regulation of human polλ by ATM-mediated phosphorylation during non-homologous end joining.非同源末端连接过程中ATM介导的磷酸化对人聚合酶λ的调控
DNA Repair (Amst). 2017 Mar;51:31-45. doi: 10.1016/j.dnarep.2017.01.004. Epub 2017 Jan 17.
6
Ribonucleotides and manganese ions improve non-homologous end joining by human Polμ.核苷酸和锰离子提高人 Polμ 的非同源末端连接。
Nucleic Acids Res. 2013 Feb 1;41(4):2428-36. doi: 10.1093/nar/gks1444. Epub 2012 Dec 28.
7
The BRCT domain and the specific loop 1 of human Polμ are targets of Cdk2/cyclin A phosphorylation.BRCT 结构域和人源 Polμ 的特定环 1 是 Cdk2/细胞周期蛋白 A 磷酸化的靶标。
DNA Repair (Amst). 2013 Oct;12(10):824-34. doi: 10.1016/j.dnarep.2013.07.007. Epub 2013 Aug 9.
8
N-terminal domains of human DNA polymerase lambda promote primer realignment during translesion DNA synthesis.人类DNA聚合酶λ的N端结构域在跨损伤DNA合成过程中促进引物重新定位。
DNA Repair (Amst). 2014 Oct;22:41-52. doi: 10.1016/j.dnarep.2014.07.008. Epub 2014 Aug 3.
9
Decision-making during NHEJ: a network of interactions in human Polμ implicated in substrate recognition and end-bridging.非同源末端连接过程中的决策:人类聚合酶μ中涉及底物识别和末端桥接的相互作用网络
Nucleic Acids Res. 2014 Jul;42(12):7923-34. doi: 10.1093/nar/gku475. Epub 2014 May 30.
10
Limited terminal transferase in human DNA polymerase mu defines the required balance between accuracy and efficiency in NHEJ.人类DNA聚合酶μ中有限的末端转移酶决定了非同源末端连接中准确性和效率之间所需的平衡。
Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16203-8. doi: 10.1073/pnas.0908492106. Epub 2009 Sep 4.

引用本文的文献

1
DNA polymerase λ Loop1 variant yields unexpected gain-of-function capabilities in nonhomologous end-joining.DNA 聚合酶 λ Loop1 变体在非同源末端连接中产生了意想不到的功能增益能力。
DNA Repair (Amst). 2024 Apr;136:103645. doi: 10.1016/j.dnarep.2024.103645. Epub 2024 Feb 3.
2
Ribonucleotide incorporation into DNA during DNA replication and its consequences.在 DNA 复制过程中核苷酸掺入 DNA 及其后果。
Crit Rev Biochem Mol Biol. 2021 Feb;56(1):109-124. doi: 10.1080/10409238.2020.1869175. Epub 2021 Jan 18.
3
Polymerase μ in non-homologous DNA end joining: importance of the order of arrival at a double-strand break in a purified system.

本文引用的文献

1
Ribonucleotides and manganese ions improve non-homologous end joining by human Polμ.核苷酸和锰离子提高人 Polμ 的非同源末端连接。
Nucleic Acids Res. 2013 Feb 1;41(4):2428-36. doi: 10.1093/nar/gks1444. Epub 2012 Dec 28.
2
DNA-binding determinants promoting NHEJ by human Polμ.促进人源 Polμ 进行非同源末端连接(NHEJ)的 DNA 结合决定因素。
Nucleic Acids Res. 2012 Dec;40(22):11389-403. doi: 10.1093/nar/gks896. Epub 2012 Oct 2.
3
BRCT domain of DNA polymerase μ has DNA-binding activity and promotes the DNA polymerization activity.
聚合酶 μ 在非同源 DNA 末端连接中的作用:在纯化体系中双链断裂到达的顺序的重要性。
Nucleic Acids Res. 2020 Apr 17;48(7):3605-3618. doi: 10.1093/nar/gkaa094.
4
Can Designer Indels Be Tailored by Gene Editing?: Can Indels Be Customized?基因编辑能否定制设计缺失?缺失能定制吗?
Bioessays. 2019 Dec;41(12):e1900126. doi: 10.1002/bies.201900126. Epub 2019 Nov 6.
5
PAXX and its paralogs synergistically direct DNA polymerase λ activity in DNA repair.PAXX 和它的同源物协同指导 DNA 聚合酶 λ 在 DNA 修复中的活性。
Nat Commun. 2018 Sep 24;9(1):3877. doi: 10.1038/s41467-018-06127-y.
6
Polμ tumor variants decrease the efficiency and accuracy of NHEJ.Polμ肿瘤变体降低了非同源末端连接的效率和准确性。
Nucleic Acids Res. 2017 Sep 29;45(17):10018-10031. doi: 10.1093/nar/gkx625.
7
Regulation of human polλ by ATM-mediated phosphorylation during non-homologous end joining.非同源末端连接过程中ATM介导的磷酸化对人聚合酶λ的调控
DNA Repair (Amst). 2017 Mar;51:31-45. doi: 10.1016/j.dnarep.2017.01.004. Epub 2017 Jan 17.
8
DNA polymerase β contains a functional nuclear localization signal at its N-terminus.DNA聚合酶β在其N端含有一个功能性核定位信号。
Nucleic Acids Res. 2017 Feb 28;45(4):1958-1970. doi: 10.1093/nar/gkw1257.
9
Damaging the Integrated HIV Proviral DNA with TALENs.利用转录激活样效应因子核酸酶(TALENs)破坏整合的HIV前病毒DNA。
PLoS One. 2015 May 6;10(5):e0125652. doi: 10.1371/journal.pone.0125652. eCollection 2015.
10
Structural basis for a novel mechanism of DNA bridging and alignment in eukaryotic DSB DNA repair.真核生物双链断裂DNA修复中DNA桥接与排列新机制的结构基础
EMBO J. 2015 Apr 15;34(8):1126-42. doi: 10.15252/embj.201489643. Epub 2015 Mar 11.
DNA 聚合酶 μ 的 BRCT 结构域具有 DNA 结合活性,并促进 DNA 聚合酶活性。
Genes Cells. 2012 Sep;17(9):790-806. doi: 10.1111/j.1365-2443.2012.01628.x. Epub 2012 Aug 16.
4
Structure of a preternary complex involving a prokaryotic NHEJ DNA polymerase.涉及原核 NHEJ DNA 聚合酶的超三元复合物的结构。
Mol Cell. 2011 Jan 21;41(2):221-31. doi: 10.1016/j.molcel.2010.12.026.
5
Modeling DNA polymerase μ motions: subtle transitions before chemistry.模拟 DNA 聚合酶 μ 的运动:化学变化前的细微转变。
Biophys J. 2010 Nov 17;99(10):3463-72. doi: 10.1016/j.bpj.2010.09.056.
6
Polymerases in nonhomologous end joining: building a bridge over broken chromosomes.非同源末端连接中的聚合酶:在断裂的染色体上搭建桥梁。
Antioxid Redox Signal. 2011 Jun 15;14(12):2509-19. doi: 10.1089/ars.2010.3429. Epub 2010 Oct 28.
7
The kinetic and chemical mechanism of high-fidelity DNA polymerases.高保真DNA聚合酶的动力学及化学机制
Biochim Biophys Acta. 2010 May;1804(5):1041-8. doi: 10.1016/j.bbapap.2010.01.006. Epub 2010 Jan 15.
8
Template strand scrunching during DNA gap repair synthesis by human polymerase lambda.人类聚合酶λ在DNA缺口修复合成过程中的模板链挤压
Nat Struct Mol Biol. 2009 Sep;16(9):967-72. doi: 10.1038/nsmb.1654. Epub 2009 Aug 23.
9
A comparison of BRCT domains involved in nonhomologous end-joining: introducing the solution structure of the BRCT domain of polymerase lambda.参与非同源末端连接的BRCT结构域比较:介绍聚合酶λ的BRCT结构域的溶液结构
DNA Repair (Amst). 2008 Aug 2;7(8):1340-51. doi: 10.1016/j.dnarep.2008.04.018. Epub 2008 Jun 26.
10
Structure of a NHEJ polymerase-mediated DNA synaptic complex.非同源末端连接聚合酶介导的DNA突触复合体的结构
Science. 2007 Oct 19;318(5849):456-9. doi: 10.1126/science.1145112.