Yasuda T, Morimatsu K, Kato R, Usukura J, Takahashi M, Ohmori H
Institute for Virus Research, Kyoto University, Japan.
EMBO J. 2001 Mar 1;20(5):1192-202. doi: 10.1093/emboj/20.5.1192.
The Escherichia coli dinI gene is one of the LexA-regulated genes, which are induced upon DNA damage. Its overexpression conferred severe UV sensitivity on wild-type cells and resulted in the inhibition of LexA and UmuD processing, reactions that are normally dependent on activated RecA in a complex with single-stranded (ss)DNA. Here, we study the mechanism by which DinI inhibits the activities of RecA. While DinI neither binds to ssDNA nor prevents the formation of RecA nucleoprotein filament, it binds to active RecA filament, thereby inhibiting its coprotease activity but not the ATPase activity. Furthermore, even under in vitro conditions where UmuD cleavage dependent on RecA-ssDNA-adeno sine-5'-(3-thiotriphosphate) is blocked in the presence of DinI, LexA is cleaved normally. This result, taken together with electron microscopy observations and linear dichroism measurements, indicates that the ternary complex remains intact in the presence of DinI, and that the affinity to the RecA filament decreases in the order LexA, DinI and UmuD. DinI is thus suited to modulating UmuD processing so as to limit SOS mutagenesis.
大肠杆菌dinI基因是受LexA调控的基因之一,在DNA损伤时被诱导表达。其过表达使野生型细胞对紫外线极度敏感,并导致LexA和UmuD的加工过程受到抑制,而这些反应通常依赖于与单链(ss)DNA形成复合物的活化RecA。在此,我们研究DinI抑制RecA活性的机制。虽然DinI既不与ssDNA结合,也不阻止RecA核蛋白丝的形成,但它能与活性RecA丝结合,从而抑制其共蛋白酶活性,而不影响ATP酶活性。此外,即使在体外条件下,当DinI存在时,依赖RecA-ssDNA-腺苷-5'-(3-硫代三磷酸)的UmuD切割被阻断,但LexA仍能正常切割。这一结果,结合电子显微镜观察和线性二色性测量,表明在DinI存在时三元复合物保持完整,并且对RecA丝的亲和力按LexA、DinI和UmuD的顺序降低。因此,DinI适合调节UmuD的加工过程,从而限制SOS诱变。