Kamatari Y O, Yamada H, Akasaka K, Jones J A, Dobson C M, Smith L J
Oxford Centre for Molecular Sciences, New Chemistry Laboratory, University of Oxford, UK.
Eur J Biochem. 2001 Mar;268(6):1782-93.
High-pressure (15)N/(1)H NMR techniques were used to characterize the conformational fluctuations of hen lysozyme, in its native state and when denatured in 8 M urea, over the pressure range 30--2000 bar. Most (1)H and (15)N signals of native lysozyme show reversible shifts to low field with increasing pressure, the average pressure shifts being 0.069 +/- 0.101 p.p.m. ((1)H) and 0.51 +/- 0.36 p.p.m. ((15)N). The shifts indicate that the hydrogen bonds formed to carbonyl groups or water molecules by the backbone amides are, on average, shortened by approximately 0.02 A as a result of pressure. In native lysozyme, six residues in the beta domain or at the alpha/beta domain interface have anomalously large nonlinear (15)N and (1)H chemical-shift changes. All these residues lie close to water-containing cavities, suggesting that there are conformational changes involving these cavities, or the water molecules within them, at high pressure. The pressure-induced (1)H and (15)N shifts for lysozyme denatured in 8 M urea are much more uniform than those for native lysozyme, with average backbone amide shifts of 0.081 +/- 0.029 p.p.m. ((1)H) and 0.57 +/- 0.14 p.p.m. ((15)N). The results show that overall there are no significant variations in the local conformational properties of denatured lysozyme with pressure, although larger shifts in the vicinity of a persistent hydrophobic cluster indicate that interactions in this part of the sequence may rearrange. NMR diffusion measurements demonstrate that the effective hydrodynamic radius of denatured lysozyme, and hence the global properties of the denatured ensemble, do not change detectably at high pressure.
采用高压(15)N/(1)H核磁共振技术,在30 - 2000巴的压力范围内,对处于天然状态以及在8 M尿素中变性的溶菌酶的构象波动进行了表征。天然溶菌酶的大多数(1)H和(15)N信号随压力增加向低场发生可逆位移,平均压力位移为0.069±0.101 ppm((1)H)和0.51±0.36 ppm((15)N)。这些位移表明,主链酰胺与羰基或水分子形成的氢键平均因压力而缩短约0.02 Å。在天然溶菌酶中,β结构域或α/β结构域界面的六个残基具有异常大的非线性(15)N和(1)H化学位移变化。所有这些残基都靠近含水腔,这表明在高压下涉及这些腔或其中水分子的构象发生了变化。在8 M尿素中变性的溶菌酶的压力诱导(1)H和(15)N位移比天然溶菌酶的位移更均匀,主链酰胺平均位移为0.081±0.029 ppm((1)H)和0.57±0.14 ppm((15)N)。结果表明,尽管在一个持久疏水簇附近的位移较大,表明该序列这部分的相互作用可能会重新排列,但变性溶菌酶的局部构象性质总体上随压力没有显著变化。核磁共振扩散测量表明,变性溶菌酶的有效流体动力学半径以及变性聚集体的整体性质在高压下没有可检测到的变化。