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从单分子拉伸的温度依赖性看DNA解链的熵与热容

Entropy and heat capacity of DNA melting from temperature dependence of single molecule stretching.

作者信息

Williams M C, Wenner J R, Rouzina I, Bloomfield V A

机构信息

Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Saint Paul, Minnesota 55108, USA.

出版信息

Biophys J. 2001 Apr;80(4):1932-9. doi: 10.1016/S0006-3495(01)76163-2.

Abstract

When a single molecule of double-stranded DNA is stretched beyond its B-form contour length, the measured force shows a highly cooperative overstretching transition. We have measured the force at which this transition occurs as a function of temperature. To do this, single molecules of DNA were captured between two polystyrene beads in an optical tweezers apparatus. As the temperature of the solution surrounding a captured molecule was increased from 11 degrees C to 52 degrees C in 500 mM NaCl, the overstretching transition force decreased from 69 pN to 50 pN. This reduction is attributed to a decrease in the stability of the DNA double helix with increasing temperature. These results quantitatively agree with a model that asserts that DNA melting occurs during the overstretching transition. With this model, the data may be analyzed to obtain the change in the melting entropy DeltaS of DNA with temperature. The observed nonlinear temperature dependence of DeltaS is a result of the positive change in heat capacity of DNA upon melting, which we determine from our stretching measurements to be DeltaC(p) = 60 +/- 10 cal/mol K bp, in agreement with calorimetric measurements.

摘要

当双链DNA的单个分子被拉伸超过其B型轮廓长度时,所测得的力会显示出高度协同的过度拉伸转变。我们测量了该转变发生时的力随温度的变化。为此,在光镊装置中,将DNA单分子捕获在两个聚苯乙烯珠之间。当捕获分子周围溶液在500 mM NaCl中温度从11℃升至52℃时,过度拉伸转变力从69 pN降至50 pN。这种降低归因于随着温度升高DNA双螺旋稳定性的下降。这些结果与一个模型定量相符,该模型认为DNA解链发生在过度拉伸转变过程中。利用这个模型,可以分析数据以获得DNA解链熵ΔS随温度的变化。观察到的ΔS的非线性温度依赖性是DNA解链时热容正变化的结果,我们通过拉伸测量确定其为ΔC(p)=60±10 cal/mol K bp,与量热测量结果一致。

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