Bustamante Carlos J, Chemla Yann R, Liu Shixin, Wang Michelle D
Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Department of Physics, University of California, Berkeley, CA, USA.
Nat Rev Methods Primers. 2021;1. doi: 10.1038/s43586-021-00021-6. Epub 2021 Mar 25.
Optical tweezers have become the method of choice in single-molecule manipulation studies. In this Primer, we first review the physical principles of optical tweezers and the characteristics that make them a powerful tool to investigate single molecules. We then introduce the modifications of the method to extend the measurement of forces and displacements to torques and angles, and to develop optical tweezers with single-molecule fluorescence detection capabilities. We discuss force and torque calibration of these instruments, their various modes of operation and most common experimental geometries. We describe the type of data obtained in each experimental design and their analyses. This description is followed by a survey of applications of these methods to the studies of protein-nucleic acid interactions, protein/RNA folding and molecular motors. We also discuss data reproducibility, the factors that lead to the data variability among different laboratories and the need to develop field standards. We cover the current limitations of the methods and possible ways to optimize instrument operation, data extraction and analysis, before suggesting likely areas of future growth.
光镊已成为单分子操纵研究中的首选方法。在本入门介绍中,我们首先回顾光镊的物理原理以及使其成为研究单分子的强大工具的特性。然后,我们介绍该方法的改进,将力和位移的测量扩展到扭矩和角度,并开发具有单分子荧光检测能力的光镊。我们讨论这些仪器的力和扭矩校准、它们的各种操作模式以及最常见的实验几何结构。我们描述在每个实验设计中获得的数据类型及其分析。接下来,我们将概述这些方法在蛋白质 - 核酸相互作用、蛋白质/RNA折叠和分子马达研究中的应用。我们还将讨论数据的可重复性、导致不同实验室数据变异性的因素以及制定领域标准的必要性。我们涵盖了这些方法当前的局限性以及优化仪器操作、数据提取和分析的可能方法,最后提出未来可能的发展领域。