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裂殖酵母组蛋白甲基转移酶Clr4的染色体结构域突变体的溶液结构、结构域特征及结构影响

Solution structure, domain features, and structural implications of mutants of the chromo domain from the fission yeast histone methyltransferase Clr4.

作者信息

Horita D A, Ivanova A V, Altieri A S, Klar A J, Byrd R A

机构信息

Structural Biophysics Laboratory, National Cancer Center at Frederick, MD 21702-1201, USA.

出版信息

J Mol Biol. 2001 Mar 30;307(3):861-70. doi: 10.1006/jmbi.2001.4515.

DOI:10.1006/jmbi.2001.4515
PMID:11273706
Abstract

The encapsulation of otherwise transcribable loci within transcriptionally inactive heterochromatin is rapidly gaining recognition as an important mechanism of epigenetic gene regulation. In the fission yeast Schizosaccharomyces pombe, heterochromatinization of the mat2/mat3 loci silences the mating-type information encoded within these loci. Here, we present the solution structure of the chromo domain from the cryptic loci regulator protein Clr4. Clr4 is known to regulate silencing and switching at the mating-type loci and to affect chromatin structure at centromeres. Clr4 and its human and Drosophila homologs have been identified as histone H3-specific methyltransferases, further implicating this family of proteins in chromatin remodeling. Our structure highlights a conserved surface that may be involved in chromo domain-ligand interactions. We have also analyzed two chromo domain mutants (W31G and W41G) that previously were shown to affect silencing and switching in full-length Clr4. Both mutants are significantly destabilized relative to wild-type.

摘要

将原本可转录的基因座包裹于转录失活的异染色质中,正迅速成为表观遗传基因调控的一种重要机制而受到认可。在裂殖酵母粟酒裂殖酵母中,mat2/mat3基因座的异染色质化使这些基因座内编码的交配型信息沉默。在此,我们展示了来自隐秘基因座调控蛋白Clr4的染色体结构域的溶液结构。已知Clr4可调控交配型基因座的沉默和转换,并影响着丝粒处的染色质结构。Clr4及其人类和果蝇同源物已被鉴定为组蛋白H3特异性甲基转移酶,这进一步表明该蛋白家族参与染色质重塑。我们的结构突出了一个可能参与染色体结构域 - 配体相互作用的保守表面。我们还分析了两个先前显示会影响全长Clr4的沉默和转换的染色体结构域突变体(W31G和W41G)。相对于野生型,这两个突变体均明显不稳定。

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Solution structure, domain features, and structural implications of mutants of the chromo domain from the fission yeast histone methyltransferase Clr4.裂殖酵母组蛋白甲基转移酶Clr4的染色体结构域突变体的溶液结构、结构域特征及结构影响
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引用本文的文献

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Structural insights into the binding mechanism of Clr4 methyltransferase to H3K9 methylated nucleosome.Clr4 甲基转移酶与 H3K9 甲基化核小体结合机制的结构见解。
Sci Rep. 2024 Mar 5;14(1):5438. doi: 10.1038/s41598-024-56248-2.
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The regional sequestration of heterochromatin structural proteins is critical to form and maintain silent chromatin.
异染色质结构蛋白的区域性隔离对于形成和维持沉默染色质至关重要。
Epigenetics Chromatin. 2022 Jan 31;15(1):5. doi: 10.1186/s13072-022-00435-w.
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Disordered region of H3K9 methyltransferase Clr4 binds the nucleosome and contributes to its activity.H3K9 甲基转移酶 Clr4 的无序区域结合核小体,并有助于其活性。
Nucleic Acids Res. 2019 Jul 26;47(13):6726-6736. doi: 10.1093/nar/gkz480.
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The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene.后生动物中组蛋白甲基转移酶基因Su(var)3-9的进化包括与一个功能不相关基因的融合及再次分裂。
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