Chen Y, Yan B, Chalovich J M, Brenner B
Mathematical Research Branch, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 9190 Rockville Pike, Bethesda, Maryland 20892-2690, USA.
Biophys J. 2001 May;80(5):2338-49. doi: 10.1016/s0006-3495(01)76204-2.
It was previously shown that a one-dimensional Ising model could successfully simulate the equilibrium binding of myosin S1 to regulated actin filaments (T. L. Hill, E. Eisenberg and L. Greene, Proc. Natl. Acad. Sci. U.S.A. 77:3186-3190, 1980). However, the time course of myosin S1 binding to regulated actin was thought to be incompatible with this model, and a three-state model was subsequently developed (D. F. McKillop and M. A. Geeves, Biophys. J. 65:693-701, 1993). A quantitative analysis of the predicted time course of myosin S1 binding to regulated actin, however, was never done for either model. Here we present the procedure for the theoretical evaluation of the time course of myosin S1 binding for both models and then show that 1) the Hill model can predict the "lag" in the binding of myosin S1 to regulated actin that is observed in the absence of Ca++ when S1 is in excess of actin, and 2) both models generate very similar families of binding curves when [S1]/[actin] is varied. This result shows that, just based on the equilibrium and pre-steady-state kinetic binding data alone, it is not possible to differentiate between the two models. Thus, the model of Hill et al. cannot be ruled out on the basis of existing pre-steady-state and equilibrium binding data. Physical mechanisms underlying the generation of the lag in the Hill model are discussed.
先前的研究表明,一维伊辛模型能够成功模拟肌球蛋白S1与调节型肌动蛋白丝的平衡结合(T. L. 希尔、E. 艾森伯格和L. 格林,《美国国家科学院院刊》77:3186 - 3190, 1980)。然而,肌球蛋白S1与调节型肌动蛋白结合的时间进程被认为与该模型不相符,随后便开发了一个三态模型(D. F. 麦基洛普和M. A. 吉夫斯,《生物物理学杂志》65:693 - 701, 1993)。然而,对于这两种模型,从未对肌球蛋白S1与调节型肌动蛋白结合的预测时间进程进行过定量分析。在此,我们给出了对两种模型中肌球蛋白S1结合时间进程进行理论评估的程序,然后表明:1)当S1过量于肌动蛋白时,在没有Ca++的情况下观察到的肌球蛋白S1与调节型肌动蛋白结合的“延迟”,希尔模型能够预测;2)当[S1]/[肌动蛋白]变化时,两种模型产生的结合曲线族非常相似。这一结果表明,仅基于平衡态和稳态前动力学结合数据,无法区分这两种模型。因此,不能根据现有的稳态前和平衡结合数据排除希尔等人的模型。文中还讨论了希尔模型中延迟产生的物理机制。