Denner E B, Paukner S, Kämpfer P, Moore E R, Abraham W R, Busse H J, Wanner G, Lubitz W
Institut für Mikrobiologie und Genetik, Universität Wien, Austria.
Int J Syst Evol Microbiol. 2001 May;51(Pt 3):827-41. doi: 10.1099/00207713-51-3-827.
Strain EDIVT, an exopolysaccharide-producing bacterium, was subjected to polyphasic characterization. The bacterium produced copious amounts of an extracellular polysaccharide, forming slimy, viscous, intensely yellow-pigmented colonies on Czapek-Dox (CZD) agar. The culture fluids of the liquid version of CZD medium were highly viscous after cultivation for 5 d. Cells of strain EDIVT were Gram-negative, catalase-positive, oxidase-negative, nonspore-forming, rod-shaped and motile. Comparisons of 16S rDNA gene sequences demonstrated that EDIVT clusters phylogenetically with the species of the genus Sphingomonas sensu stricto. The G+C content of the DNA (64.5 mol%), the presence of ubiquinone Q-10, the presence of 2-hydroxymyristic acid (14:0 2-OH) as the major hydroxylated fatty acid, the absence of 3-hydroxy fatty acids and the detection of sym-homospermidine as the major component in the polyamine pattern, together with the presence of sphingoglycolipid, supported this delineation. 16S rDNA sequence analysis indicated that strain EDIVT is most closely related (99.4% similarity) to Sphingomonas trueperi LMG 2142T. DNA-DNA hybridization showed that the level of relatedness to S. trueperi is only 45.5%. Further differences were apparent in the cellular fatty acid profile, the polar lipid pattern, the Fourier-transform infrared spectrum and whole-cell proteins and in a number of biochemical characteristics. On the basis of the estimated phylogenetic position derived from 16S rDNA sequence data, DNA-DNA reassociation and phenotypic differences, strain EDIVT (= CIP 106154T = DSM 13101T) was recognized as a new species of Sphingomonas, for which the name Sphingomonas pituitosa sp. nov. is proposed. A component analysis of the exopolysaccharide (named PS-EDIV) suggested that it represents a novel type of sphingan composed of glucose, rhamnose and an unidentified sugar. Glucuronic acid, which is commonly found in sphingans, was absent. The mean molecular mass of PS-EDIV was approximately 3 x 10(6) Da.
对产胞外多糖的菌株EDIVT进行了多相分类鉴定。该细菌产生大量胞外多糖,在察氏(Czapek-Dox,CZD)琼脂上形成黏滑、黏稠、颜色深黄的菌落。CZD液体培养基培养5天后,培养液高度黏稠。EDIVT菌株的细胞革兰氏阴性、过氧化氢酶阳性、氧化酶阴性、不产芽孢、杆状且具运动性。16S rDNA基因序列比较表明,EDIVT在系统发育上与狭义鞘氨醇单胞菌属(Sphingomonas sensu stricto)的物种聚类在一起。DNA的G+C含量(64.5 mol%)、泛醌Q-10的存在、作为主要羟基化脂肪酸的2-羟基肉豆蔻酸(14:0 2-OH)的存在、3-羟基脂肪酸的缺失以及在多胺模式中作为主要成分的对称高亚精胺的检测,再加上鞘糖脂的存在,支持了这种分类。16S rDNA序列分析表明,菌株EDIVT与真珀鞘氨醇单胞菌(Sphingomonas trueperi)LMG 2142T关系最为密切(相似性为99.4%)。DNA-DNA杂交显示,与真珀鞘氨醇单胞菌的亲缘关系水平仅为45.5%。在细胞脂肪酸谱、极性脂模式、傅里叶变换红外光谱、全细胞蛋白以及一些生化特征方面,进一步的差异也很明显。基于从16S rDNA序列数据估计的系统发育位置、DNA-DNA重结合以及表型差异,菌株EDIVT(= CIP 106154T = DSM 13101T)被认定为鞘氨醇单胞菌属的一个新物种,为此提出了新种名鞘氨醇单胞菌垂体新种(Sphingomonas pituitosa sp. nov.)。对胞外多糖(命名为PS-EDIV)的成分分析表明,它代表了一种由葡萄糖、鼠李糖和一种未鉴定的糖组成的新型鞘脂聚糖。鞘脂聚糖中常见的葡萄糖醛酸不存在。PS-EDIV的平均分子量约为3×10(6) Da。