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新种桑氏鞘氨醇单胞菌,从土壤中分离得到。

Sphingomonas sanxanigenens sp. nov., isolated from soil.

作者信息

Huang Hai-Dong, Wang Wei, Ma Ting, Li Guo-Qiang, Liang Feng-Lai, Liu Ru-Lin

机构信息

Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, PR China.

出版信息

Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):719-23. doi: 10.1099/ijs.0.000257-0.

Abstract

Strain NX02(T), a Gram-negative, non-spore-forming, rod-shaped bacterium, was isolated from soil, and its taxonomic position was investigated using a polyphasic approach. Chemotaxonomic analysis revealed that strain NX02(T) possessed Q-10 as the predominant ubiquinone, sym-homospermidine as the major polyamine and C(18 : 1)omega7c, C(16 : 0) and C(14 : 0) 2-OH as the major fatty acids. The main polar lipids were sphingoglycolipid, phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, phosphatidyldimethylethanolamine and an unidentified glycolipid. The DNA G+C content was 66.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain NX02(T) belongs to the alpha-4 subgroup of the Proteobacteria, exhibiting the highest sequence similarity with respect to Sphingomonas azotifigens NBRC 15497(T) (95.9 %), Sphingomonas pituitosa DSM 13101(T) (95.8 %) and Sphingomonas dokdonensis KCTC 12541(T) (95.8 %). On the basis of these results, strain NX02(T) represents a novel species of the genus Sphingomonas sensu stricto, for which the name Sphingomonas sanxanigenens sp. nov. is proposed. The type strain is NX02(T) (=DSM 19645(T) =CGMCC 1.6417(T)).

摘要

菌株NX02(T)是一种革兰氏阴性、无芽孢形成、杆状细菌,从土壤中分离得到,并采用多相分类方法对其分类地位进行了研究。化学分类分析表明,菌株NX02(T)以Q-10作为主要泛醌,以对称高亚精胺作为主要多胺,以C(18 : 1)ω7c、C(16 : 0)和C(14 : 0) 2-OH作为主要脂肪酸。主要极性脂为鞘糖脂、磷脂酰胆碱、磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰单甲基乙醇胺、磷脂酰二甲基乙醇胺和一种未鉴定的糖脂。DNA G+C含量为66.4 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株NX02(T)属于变形菌门的α-4亚群,与固氮鞘氨醇单胞菌NBRC 15497(T)(95.9%)、垂体鞘氨醇单胞菌DSM 13101(T)(95.8%)和独岛鞘氨醇单胞菌KCTC 12541(T)(95.8%)具有最高的序列相似性。基于这些结果,菌株NX02(T)代表了鞘氨醇单胞菌属严格意义上的一个新物种,为此提出了新名称鞘氨醇单胞菌产三仙胶菌(Sphingomonas sanxanigenens sp. nov.)。模式菌株为NX02(T)(=DSM 19645(T)=CGMCC 1.6417(T))。

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