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简单膜 - 水界面的分子动力学研究:细胞生命起源中的结构与功能

Molecular dynamics studies of simple membrane-water interfaces: structure and functions in the beginnings of cellular life.

作者信息

Pohorille A, Wilson M A

机构信息

Department of Pharmaceutical Chemistry, University of California, San Francisco 94143, USA.

出版信息

Orig Life Evol Biosph. 1995 Jun;25(1-3):21-46. doi: 10.1007/BF01581571.

Abstract

Molecular dynamics computer simulations of the structure and functions of a simple membrane are performed in order to examine whether membranes provide an environment capable of promoting protobiological evolution. Our model membrane is composed of glycerol 1-monooleate. It is found that the bilayer surface fluctuates in time and space, occasionally creating thinning defects in the membrane. These defects are essential for passive transport of simple ions across membranes because they reduce the Born barrier to this process by approximately 40%. Negative ions are transferred across the bilayer more readily than positive ions due to favorable interactions with the electric field at the membrane-water interface. Passive transport of neutral molecules is, in general, more complex than predicted by the solubility-diffusion model. In particular, molecules which exhibit sufficient hydrophilicity and lipophilicity concentrate near membrane surfaces and experience "interfacial resistance" to transport. The membrane-water interface forms an environment suitable for heterogeneous catalysis. Several possible mechanisms leading to an increase of reaction rates at the interface are discussed. We conclude that vesicles have many properties that make them very good candidates for earliest protocells. Some potentially fruitful directions of experimental and theoretical research on this subject are proposed.

摘要

为了研究膜是否能提供一个促进原生生物学进化的环境,我们对一种简单膜的结构和功能进行了分子动力学计算机模拟。我们的模型膜由甘油单油酸酯组成。研究发现,双层膜表面在时间和空间上波动,偶尔会在膜中产生变薄缺陷。这些缺陷对于简单离子跨膜的被动运输至关重要,因为它们将此过程的玻恩势垒降低了约40%。由于与膜 - 水界面处的电场有良好的相互作用,负离子比正离子更容易穿过双层膜。一般来说,中性分子的被动运输比溶解度 - 扩散模型预测的更为复杂。特别是,具有足够亲水性和亲脂性的分子会聚集在膜表面附近,并经历“界面阻力”以进行运输。膜 - 水界面形成了一个适合非均相催化的环境。讨论了几种可能导致界面反应速率增加的机制。我们得出结论,囊泡具有许多特性,使其成为最早的原始细胞的非常好的候选者。提出了关于该主题的一些潜在富有成果的实验和理论研究方向。

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