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转座子标签技术与拟南芥根系发育研究

Transposon tagging and the study of root development in Arabidopsis.

作者信息

Tsugeki R, Olson M L, Fedoroff N V

机构信息

Biotechnology Institute, The Pennsylvania State University, University Park, USA.

出版信息

Gravit Space Biol Bull. 1998 May;11(2):79-87.

PMID:11540642
Abstract

The maize Ac-Ds transposable element family has been used as the basis of transposon mutagenesis systems that function in a variety of plants, including Arabidopsis. We have developed modified transposons and methods which simplify the detection, cloning and analysis of insertion mutations. We have identified and are analyzing two plant lines in which genes expressed either in the root cap cells or in the quiescent cells, cortex/endodermal initial cells and columella cells of the root cap have been tagged with a transposon carrying a reporter gene. A gene expressed in root cap cells tagged with an enhancer-trap Ds was isolated and its corresponding EST cDNA was identified. Nucleotide and deduced amino acid sequences of the gene show no significant similarity to other genes in the database. Genetic ablation experiments have been done by fusing a root cap-specific promoter to the diphtheria toxin A-chain gene and introducing the fusion construct into Arabidopsis plants. We find that in addition to eliminating gravitropism, root cap ablation inhibits elongation of roots by lowering root meristematic activities.

摘要

玉米Ac-Ds转座因子家族已被用作转座子诱变系统的基础,该系统在包括拟南芥在内的多种植物中发挥作用。我们开发了改良的转座子和方法,简化了插入突变的检测、克隆和分析。我们已经鉴定并正在分析两个植物株系,其中在根冠细胞或根冠静止细胞、皮层/内皮层原始细胞和柱细胞中表达的基因已被携带报告基因的转座子标记。分离出了一个用增强子捕获Ds标记的根冠细胞中表达的基因,并鉴定了其相应的EST cDNA。该基因的核苷酸和推导的氨基酸序列与数据库中的其他基因没有显著相似性。通过将根冠特异性启动子与白喉毒素A链基因融合,并将融合构建体导入拟南芥植物中,进行了基因消融实验。我们发现,除了消除向重力性外,根冠消融还通过降低根分生组织活性来抑制根的伸长。

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Transposon tagging and the study of root development in Arabidopsis.转座子标签技术与拟南芥根系发育研究
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2
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LRP1, a gene expressed in lateral and adventitious root primordia of arabidopsis.LRP1,一个在拟南芥侧根和不定根原基中表达的基因。
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Molecular analysis of Arabidopsis endosperm and embryo promoter trap lines: reporter-gene expression can result from T-DNA insertions in antisense orientation, in introns and in intergenic regions, in addition to sense insertion at the 5' end of genes.拟南芥胚乳和胚启动子捕获系的分子分析:除了基因5'端的正义插入外,报告基因的表达还可由反义方向、内含子和基因间区域的T-DNA插入导致。
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A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.5814个解离转座子标签化且序列索引的拟南芥株系资源,这些株系从第5号染色体上的起始位点转座而来。
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引用本文的文献

1
A mathematical model explores the contributions of bending and stretching forces to shoot gravitropism in Arabidopsis.一个数学模型探究了弯曲力和拉伸力对拟南芥茎重力感应的作用。
Quant Plant Biol. 2020 Dec 15;1:e4. doi: 10.1017/qpb.2020.5. eCollection 2020.
2
Global expression analysis of nucleotide binding site-leucine rich repeat-encoding and related genes in Arabidopsis.拟南芥中核苷酸结合位点富含亮氨酸重复序列编码基因及相关基因的全基因组表达分析
BMC Plant Biol. 2007 Oct 23;7:56. doi: 10.1186/1471-2229-7-56.
3
Genetic ablation of root cap cells in Arabidopsis.
拟南芥根冠细胞的基因消融
Proc Natl Acad Sci U S A. 1999 Oct 26;96(22):12941-6. doi: 10.1073/pnas.96.22.12941.