• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

5814个解离转座子标签化且序列索引的拟南芥株系资源,这些株系从第5号染色体上的起始位点转座而来。

A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.

作者信息

Ito Takuya, Motohashi Reiko, Kuromori Takashi, Noutoshi Yoshiteru, Seki Motoaki, Kamiya Asako, Mizukado Saho, Sakurai Tetsuya, Shinozaki Kazuo

机构信息

Plant Molecular Biology Laboratory, RIKEN Tsukuba Institute, 3-1-1 Koyadai, Tsukuba, 305-0074 Japan.

出版信息

Plant Cell Physiol. 2005 Jul;46(7):1149-53. doi: 10.1093/pcp/pci112. Epub 2005 Apr 19.

DOI:10.1093/pcp/pci112
PMID:15840642
Abstract

We report here the generation of an additional collection of Dissociation (Ds) transposon-tagged, sequence-indexed lines of Arabidopsis thaliana. Our RIKEN Ds insertion collection now totals 17,668 lines. Our collection has preferential insertions in chromosomes 1 and 5, because Ds was transposed from start loci on those chromosomes (11,854 and 5,814 lines, respectively). We describe here features of the latter 5,814 lines. The former 11,854 lines have been described previously. We have created a searchable database of the insertion sites and mutated genes (http://rarge.gsc.riken.jp/), and are depositing these lines in the RIKEN BioResource Center (http://www.brc.riken.go.jp/lab/epd/Eng/). Our collection of these mutants will contribute to progress in functional genomics of plants.

摘要

我们在此报告拟南芥解离(Ds)转座子标签化、序列索引系的新增集合的构建情况。我们的理化学研究所Ds插入系集合目前总计17668个株系。我们的集合在第1和第5号染色体上有优先插入,因为Ds是从这些染色体上的起始位点转座而来的(分别为11854和5814个株系)。我们在此描述后5814个株系的特征。前11854个株系此前已作过描述。我们创建了一个可搜索的插入位点和突变基因数据库(http://rarge.gsc.riken.jp/),并将这些株系保藏于理化学研究所生物资源中心(http://www.brc.riken.go.jp/lab/epd/Eng/)。我们对这些突变体的集合将有助于植物功能基因组学的进展。

相似文献

1
A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.5814个解离转座子标签化且序列索引的拟南芥株系资源,这些株系从第5号染色体上的起始位点转座而来。
Plant Cell Physiol. 2005 Jul;46(7):1149-53. doi: 10.1093/pcp/pci112. Epub 2005 Apr 19.
2
A collection of 11 800 single-copy Ds transposon insertion lines in Arabidopsis.拟南芥中11800个单拷贝Ds转座子插入系的集合。
Plant J. 2004 Mar;37(6):897-905. doi: 10.1111/j.1365.313x.2004.02009.x.
3
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome.RARGE:一个涵盖从转录组到表型组的理化学研究所拟南芥资源的大规模数据库。
Nucleic Acids Res. 2005 Jan 1;33(Database issue):D647-50. doi: 10.1093/nar/gki014.
4
A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis.一项利用4000个拟南芥基因编码区Ds插入突变体进行表型分析的试验。
Plant J. 2006 Aug;47(4):640-51. doi: 10.1111/j.1365-313X.2006.02808.x. Epub 2006 Jun 30.
5
A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome.一种用于在拟南芥基因组上进行基因敲除系虚拟筛选的本地转座解离元件新资源。
Plant Physiol. 2002 Aug;129(4):1695-9. doi: 10.1104/pp.002774.
6
The Chloroplast Function Database: a large-scale collection of Arabidopsis Ds/Spm- or T-DNA-tagged homozygous lines for nuclear-encoded chloroplast proteins, and their systematic phenotype analysis.叶绿体功能数据库:一个大规模的拟南芥 Ds/Spm-或 T-DNA 标签纯合系的集合,这些纯合系用于核编码的叶绿体蛋白,并对其进行系统表型分析。
Plant J. 2010 Feb 1;61(3):529-42. doi: 10.1111/j.1365-313X.2009.04074.x. Epub 2009 Nov 14.
7
A collection of sequenced and mapped Ds transposon insertion sites in Arabidopsis thaliana.拟南芥中已测序和定位的Ds转座子插入位点集合。
Plant Mol Biol. 2002 Sep;50(1):93-110. doi: 10.1023/a:1016099215667.
8
RARTF: database and tools for complete sets of Arabidopsis transcription factors.RARTF:拟南芥转录因子全集的数据库及工具
DNA Res. 2005;12(4):247-56. doi: 10.1093/dnares/dsi011.
9
Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions.拟南芥中T-DNA插入位点分布模式的分析揭示了无插入基因的特殊特征。
Genomics. 2006 May;87(5):645-52. doi: 10.1016/j.ygeno.2005.12.010. Epub 2006 Feb 20.
10
Transposon tagging and the study of root development in Arabidopsis.转座子标签技术与拟南芥根系发育研究
Gravit Space Biol Bull. 1998 May;11(2):79-87.

引用本文的文献

1
Cloning of Maize Transposon into Reveals the Polychromatic Sequence Landscape of Refractorily Propagated Plasmids.将玉米转座子克隆到揭示抗增殖质粒细胞质粒多色序列景观。
Int J Mol Sci. 2022 Oct 9;23(19):11993. doi: 10.3390/ijms231911993.
2
An Efficient System for Transposon Tagging in .高效的. 转座子标签系统
Plant Physiol. 2019 May;180(1):56-65. doi: 10.1104/pp.18.00875. Epub 2019 Mar 13.
3
A novel glycosyltransferase catalyses the transfer of glucose to glucosylated anthocyanins in purple sweet potato.一种新型糖基转移酶催化葡萄糖向紫色甘薯中糖基化花色苷的转移。
J Exp Bot. 2018 Nov 26;69(22):5444-5459. doi: 10.1093/jxb/ery305.
4
Nitrate-Regulated Glutaredoxins Control Arabidopsis Primary Root Growth.硝酸盐调节的谷氧还蛋白控制拟南芥主根生长。
Plant Physiol. 2016 Feb;170(2):989-99. doi: 10.1104/pp.15.01776. Epub 2015 Dec 11.
5
Characterization of a potato activation-tagged mutant, nikku, and its partial revertant.一个马铃薯激活标签突变体nikku及其部分回复突变体的特征分析。
Planta. 2015 Jun;241(6):1481-95. doi: 10.1007/s00425-015-2272-x. Epub 2015 Mar 13.
6
High-throughput generation of an activation-tagged mutant library for functional genomic analyses in tobacco.用于烟草功能基因组分析的激活标签突变体文库的高通量构建
Planta. 2015 Mar;241(3):629-40. doi: 10.1007/s00425-014-2186-z. Epub 2014 Nov 19.
7
Integrated analysis of transcriptome and metabolome of Arabidopsis albino or pale green mutants with disrupted nuclear-encoded chloroplast proteins.拟南芥白化或浅绿突变体中核编码叶绿体蛋白缺失的转录组和代谢组的综合分析。
Plant Mol Biol. 2014 Jul;85(4-5):411-28. doi: 10.1007/s11103-014-0194-9. Epub 2014 May 3.
8
Transposon based activation tagging in diploid strawberry and monoploid derivatives of potato.基于转座子的激活标签技术在二倍体草莓和马铃薯单倍体衍生物中的应用
Plant Cell Rep. 2014 Jul;33(7):1203-16. doi: 10.1007/s00299-014-1610-y. Epub 2014 Apr 12.
9
Kaempferol 3-O-rhamnoside-7-O-rhamnoside is an endogenous flavonol inhibitor of polar auxin transport in Arabidopsis shoots.山奈酚3 - O - 鼠李糖苷 - 7 - O - 鼠李糖苷是拟南芥茎中极性生长素运输的内源性黄酮醇抑制剂。
New Phytol. 2014 Jan;201(2):466-475. doi: 10.1111/nph.12558. Epub 2013 Oct 25.
10
Cysteine-generated sulfide in the cytosol negatively regulates autophagy and modulates the transcriptional profile in Arabidopsis.细胞质中半胱氨酸生成的硫化物负调节自噬,并调节拟南芥中的转录谱。
Plant Cell. 2012 Nov;24(11):4621-34. doi: 10.1105/tpc.112.105403. Epub 2012 Nov 9.