• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

解析pH诱导的构象变化的各个组成部分。

Resolving the individual components of a pH-induced conformational change.

作者信息

Blouin C, Guillemette J G, Wallace C J

机构信息

Department of Biochemistry and Molecular Biology, Dalhousie University, Nova Scotia B3H 4H7, Canada.

出版信息

Biophys J. 2001 Oct;81(4):2331-8. doi: 10.1016/S0006-3495(01)75879-1.

DOI:10.1016/S0006-3495(01)75879-1
PMID:11566802
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1301703/
Abstract

This communication introduces a simple method to determine the pKs of microscopic ionizations from complex titration curves. We used this approach to study the alkaline transition (pH-dependent ligand exchange) of mitochondrial cytochrome c. The linearization of titration curves permitted resolution of two to three limiting microscopic ionizations. By combining these data with studies of the temperature dependence of ligand-exchange equilibria, we found evidence that the alkaline transition comprises two chemically distinct processes: the deprotonation of the alternative ligands and the break of the iron-methionine ligation bond. We also noted that, in the horse and untrimethylated S. cerevisiae iso-1 cytochromes c, the permissible deprotonation of the epsilon-amino group of Lys(72) allows formation of an alkaline isomer at lower pH, with lesser stability, which leads to hysteresis in the titration curves. The linearization of the titration curves for different cytochromes c thus brings insight on the microscopic contributions to conformational stability.

摘要

本通讯介绍了一种从复杂滴定曲线确定微观电离pK值的简单方法。我们用这种方法研究了线粒体细胞色素c的碱性转变(pH依赖的配体交换)。滴定曲线的线性化使得两到三个极限微观电离得以分辨。通过将这些数据与配体交换平衡的温度依赖性研究相结合,我们发现有证据表明碱性转变包括两个化学性质不同的过程:替代配体的去质子化和铁-甲硫氨酸配位键的断裂。我们还注意到,在马和未甲基化的酿酒酵母同工型1细胞色素c中,Lys(72)的ε-氨基可允许的去质子化使得在较低pH下形成碱性异构体,但其稳定性较低,这导致滴定曲线出现滞后现象。因此,不同细胞色素c滴定曲线的线性化有助于深入了解对构象稳定性的微观贡献。

相似文献

1
Resolving the individual components of a pH-induced conformational change.解析pH诱导的构象变化的各个组成部分。
Biophys J. 2001 Oct;81(4):2331-8. doi: 10.1016/S0006-3495(01)75879-1.
2
Proton titration curve of yeast iso-1-ferricytochrome c. Electrostatic and conformational effects of point mutations.酵母同功-1-铁细胞色素c的质子滴定曲线。点突变的静电和构象效应。
Biochemistry. 1991 Mar 5;30(9):2377-83. doi: 10.1021/bi00223a012.
3
Bacterial expression of a mitochondrial cytochrome c. Trimethylation of lys72 in yeast iso-1-cytochrome c and the alkaline conformational transition.线粒体细胞色素c的细菌表达。酵母同工-1-细胞色素c中赖氨酸72的三甲基化与碱性构象转变。
Biochemistry. 1998 Apr 28;37(17):6124-31. doi: 10.1021/bi972188d.
4
Proton-mediated dynamics of the alkaline conformational transition of yeast iso-1-cytochrome c.质子介导的酵母同工-1-细胞色素c碱性构象转变的动力学
J Am Chem Soc. 2004 Jun 2;126(21):6751-8. doi: 10.1021/ja0494454.
5
Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c: 1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102.自旋标记酵母异-1-细胞色素c的动力学和运动动力学:1. 停流电子顺磁共振作为探测在半胱氨酸102处自旋标记的C端螺旋蛋白质折叠/去折叠的探针
Biochemistry. 1997 Mar 11;36(10):2884-97. doi: 10.1021/bi962155i.
6
pH dependence of formation of a partially unfolded state of a Lys 73 --> His variant of iso-1-cytochrome c: implications for the alkaline conformational transition of cytochrome c.异-1-细胞色素c的赖氨酸73→组氨酸变体形成部分解折叠状态的pH依赖性:对细胞色素c碱性构象转变的影响
Biochemistry. 2000 Nov 7;39(44):13584-94. doi: 10.1021/bi0017778.
7
Alkaline conformational transition and gated electron transfer with a Lys 79 --> his variant of iso-1-cytochrome c.碱性构象转变以及赖氨酸79突变为组氨酸的异-1-细胞色素c变体的门控电子转移
Biochemistry. 2007 Sep 18;46(37):10643-54. doi: 10.1021/bi700992y. Epub 2007 Aug 22.
8
Free energy of transition for the individual alkaline conformers of yeast iso-1-cytochrome c.酵母同工酶-1-细胞色素c各个碱性构象体的转变自由能。
Biochemistry. 2007 Feb 13;46(6):1694-702. doi: 10.1021/bi061961e. Epub 2007 Jan 23.
9
Folding of horse cytochrome c in the reduced state.还原态马细胞色素c的折叠
J Mol Biol. 2001 Oct 5;312(5):1135-60. doi: 10.1006/jmbi.2001.4993.
10
pH-dependent equilibria of yeast Met80Ala-iso-1-cytochrome c probed by NMR spectroscopy: a comparison with the wild-type protein.通过核磁共振光谱法探究酵母Met80Ala-异-1-细胞色素c的pH依赖性平衡:与野生型蛋白质的比较
Chem Biol. 1995 Jun;2(6):377-83. doi: 10.1016/1074-5521(95)90218-x.

引用本文的文献

1
Diverse functions of cytochrome c in cell death and disease.细胞死亡和疾病中细胞色素 c 的多种功能。
Cell Death Differ. 2024 Apr;31(4):387-404. doi: 10.1038/s41418-024-01284-8. Epub 2024 Mar 23.
2
Heme-Protein Interactions and Functional Relevant Heme Deformations: The Cytochrome c Case.血红素蛋白相互作用和功能相关的血红素变形:细胞色素 c 案例。
Molecules. 2022 Dec 9;27(24):8751. doi: 10.3390/molecules27248751.
3
Relating the multi-functionality of cytochrome c to membrane binding and structural conversion.将细胞色素c的多功能性与膜结合及结构转变相关联。
Biophys Rev. 2018 Aug;10(4):1151-1185. doi: 10.1007/s12551-018-0409-4. Epub 2018 Mar 24.
4
Structural basis of mitochondrial dysfunction in response to cytochrome phosphorylation at tyrosine 48.线粒体功能障碍的结构基础与酪氨酸 48 位细胞色素磷酸化的反应有关。
Proc Natl Acad Sci U S A. 2017 Apr 11;114(15):E3041-E3050. doi: 10.1073/pnas.1618008114. Epub 2017 Mar 27.
5
Disruption of a hydrogen bond network in human versus spider monkey cytochrome c affects heme crevice stability.人类与蜘蛛猴细胞色素c中氢键网络的破坏会影响血红素裂隙稳定性。
J Inorg Biochem. 2016 May;158:62-69. doi: 10.1016/j.jinorgbio.2015.12.025. Epub 2015 Dec 31.
6
The response of Ω-loop D dynamics to truncation of trimethyllysine 72 of yeast iso-1-cytochrome c depends on the nature of loop deformation.酵母同工酶-1-细胞色素c的三甲基赖氨酸72截短对Ω环D动力学的响应取决于环变形的性质。
J Biol Inorg Chem. 2015 Jul;20(5):805-19. doi: 10.1007/s00775-015-1267-1. Epub 2015 May 7.
7
Effect of an Ala81His mutation on the Met80 loop dynamics of iso-1-cytochrome c.Ala81His突变对同工酶-1-细胞色素c的Met80环动力学的影响。
Biochemistry. 2015 Mar 10;54(9):1729-42. doi: 10.1021/bi501252z. Epub 2015 Feb 24.
8
Near-exact enthalpy-entropy compensation governs the thermal unfolding of protonation states of oxidized cytochrome c.近乎精确的焓-熵补偿作用支配着氧化型细胞色素c质子化状态的热解折叠过程。
J Biol Inorg Chem. 2014 Oct;19(7):1181-94. doi: 10.1007/s00775-014-1174-x. Epub 2014 Jul 17.
9
Characterization of alkaline transitions in ferricytochrome c using carbon-deuterium infrared probes.使用碳-氘红外探针表征高铁细胞色素c中的碱性转变。
Biochemistry. 2008 Dec 23;47(51):13470-80. doi: 10.1021/bi801223n.
10
Cytochrome c impaled: investigation of the extended lipid anchorage of a soluble protein to mitochondrial membrane models.细胞色素c被嵌入:可溶性蛋白质与线粒体膜模型的扩展脂质锚定研究。
Biochem J. 2007 Oct 15;407(2):179-87. doi: 10.1042/BJ20070459.

本文引用的文献

1
THE 695-MMM. BAND OF FERRICYTOCHROME C AND ITS RELATIONSHIP TO PROTEIN CONFORMATION.细胞色素C的695毫微米谱带及其与蛋白质构象的关系。
Biochemistry. 1964 Aug;3:1045-9. doi: 10.1021/bi00896a006.
2
A novel view of pH titration in biomolecules.生物分子中pH滴定的新观点。
Biochemistry. 2001 Mar 27;40(12):3413-9. doi: 10.1021/bi002740q.
3
Characterization of an alkaline transition intermediate stabilized in the Phe82Trp variant of yeast iso-1-cytochrome c.酵母同工酶-1-细胞色素c的Phe82Trp变体中稳定存在的碱性转变中间体的表征
Biochemistry. 2000 Aug 1;39(30):9047-54. doi: 10.1021/bi001095k.
4
Thermodynamics of the alkaline transition of cytochrome c.细胞色素c碱性转变的热力学
Biochemistry. 1999 Jun 22;38(25):7900-7. doi: 10.1021/bi983060e.
5
Bacterial expression of a mitochondrial cytochrome c. Trimethylation of lys72 in yeast iso-1-cytochrome c and the alkaline conformational transition.线粒体细胞色素c的细菌表达。酵母同工-1-细胞色素c中赖氨酸72的三甲基化与碱性构象转变。
Biochemistry. 1998 Apr 28;37(17):6124-31. doi: 10.1021/bi972188d.
6
The role of a conserved water molecule in the redox-dependent thermal stability of iso-1-cytochrome c.一个保守水分子在异-1-细胞色素c的氧化还原依赖性热稳定性中的作用。
J Biol Chem. 1996 Nov 15;271(46):29088-93. doi: 10.1074/jbc.271.46.29088.
7
On the pH dependence of protein stability.论蛋白质稳定性对pH的依赖性。
J Mol Biol. 1993 May 20;231(2):459-74. doi: 10.1006/jmbi.1993.1294.
8
Redesign of the interior hydrophilic region of mitochondrial cytochrome c by site-directed mutagenesis.通过定点诱变对线粒体细胞色素c内部亲水区进行重新设计。
Biochemistry. 1993 May 25;32(20):5431-5. doi: 10.1021/bi00071a019.
9
The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.一个保守的内部水分子及其相关氢键网络在细胞色素c中的作用。
J Mol Biol. 1994 Feb 25;236(3):786-99. doi: 10.1006/jmbi.1994.1189.
10
Conformation change of cytochrome c. I. Ferrocytochrome c structure refined at 1.5 A resolution.细胞色素c的构象变化。I. 亚铁细胞色素c结构在1.5埃分辨率下的精修。
J Mol Biol. 1981 Nov 25;153(1):79-94. doi: 10.1016/0022-2836(81)90528-3.