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利用质子和碳核磁共振谱的从头算归属确定粘红酵母YR-2胞外甘露聚糖的结构

Structural determination of an exocellular mannan from Rhodotorula mucilaginosa YR-2 using ab initio assignment of proton and carbon NMR spectra.

作者信息

Takita J, Katohda S, Sugiyama H

机构信息

Nitto Best Co. Ltd., Sagae 991-8610, Japan.

出版信息

Carbohydr Res. 2001 Sep 28;335(2):133-9. doi: 10.1016/s0008-6215(01)00215-4.

Abstract

The structure of the title mannan was determined exclusively by NMR. Because of the short relaxation time of the native mannan (100 kDa), a partially hydrolyzed mannan (10 kDa) was used for proton assignments by COSY, to correlate proton and carbon signals by HMQC, and to determine linkage positions between residues by HMBC. A further hydrolyzed mannan (oligomers of approximately 1.5 kDa) was used to determine the anomeric configuration, using Wilker's quasi-3D method [Wilker, W.; Leibfritz, D. Magn. Reson. Chem. 1995, 33, 632-638]. The procedure presented here can be used to determine the structure of any polysaccharide.

摘要

标题中甘露聚糖的结构完全由核磁共振(NMR)确定。由于天然甘露聚糖(100 kDa)的弛豫时间较短,因此使用部分水解的甘露聚糖(10 kDa)通过COSY进行质子归属,通过HMQC关联质子和碳信号,并通过HMBC确定残基之间的连接位置。使用威尔克的准3D方法[威尔克,W.;莱布弗里茨,D.《磁共振化学》1995年,33卷,632 - 638页],进一步水解的甘露聚糖(约1.5 kDa的低聚物)用于确定异头构型。这里介绍的方法可用于确定任何多糖的结构。

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