Krammer André, Craig David, Thomas Wendy E, Schulten Klaus, Vogel Viola
Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Matrix Biol. 2002 Mar;21(2):139-47. doi: 10.1016/s0945-053x(01)00197-4.
The synergy site on fibronectin's FN-III(9) module, located approximately 32 A away from the RGD-loop on FN-III(10), greatly enhances integrin alpha(5)beta(1) mediated cell binding. Since fibronectin is exposed to mechanical forces acting on the extracellular matrix in vivo, we used steered molecular dynamics to study how mechanical stretching of FN-III(9-10) affects the relative distance between these two synergistic sites. Our simulations predict the existence of an intermediate state prior to unfolding. In this state, the synergy-RGD distance is increased from 32 A to approximately 55 A, while the conformations of both sites remain unperturbed. This distance is too large for both sites to co-bind the same receptor, as indicated by experiments that confirm that increasing the length of the linker chain between FN-III(9) and FN-III(10) reduces alpha(5)beta(1) binding. Our simulations thus suggest that increased alpha(5)beta(1)-binding attributed to the synergy site, along with the associated downstream cell-signaling events, can be turned off mechanically by stretching FN-III(9-10) into this intermediate state. The potential physiological implications are discussed.
纤连蛋白FN-III(9)模块上的协同位点距离FN-III(10)上的RGD环约32埃,能极大增强整合素α(5)β(1)介导的细胞黏附。由于纤连蛋白在体内会受到作用于细胞外基质的机械力影响,我们利用引导分子动力学来研究FN-III(9 - 10)的机械拉伸如何影响这两个协同位点之间的相对距离。我们的模拟预测在展开之前存在一个中间状态。在这个状态下,协同位点与RGD位点之间的距离从32埃增加到约55埃,而两个位点的构象保持不变。实验表明,增加FN-III(9)和FN-III(10)之间连接链的长度会降低α(5)β(1)的结合,这表明该距离对于两个位点共同结合同一受体来说太大了。因此,我们的模拟表明,归因于协同位点的α(5)β(1)结合增加以及相关的下游细胞信号事件,可以通过将FN-III(9 - 10)拉伸到这个中间状态而被机械性地关闭。我们还讨论了其潜在的生理意义。