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在适应寒冷环境的鱼类中发现的一个胰蛋白酶进化枝。

A clade of trypsins found in cold-adapted fish.

作者信息

Roach Jared C

机构信息

Institute for Systems Biology, Seattle, Washington 98103, USA.

出版信息

Proteins. 2002 Apr 1;47(1):31-44.

Abstract

A clade of trypsins, known as group III, is identified by phylogenetic analysis. These trypsins occur in fish that spend all or part of their lives at temperatures near 0 degrees C and may represent extreme psychrophilic enzymes. A principal component analysis of amino acid compositions distinguishes group III from mesophilic trypsins, as do molecular trees and multidimensional scaling of molecular sequence distances. The primary sequences of group III trypsins, in conjunction with the known structures of mesophilic trypsins, permit insight into function and mechanisms of cold adaption. The techniques employed are broadly applicable to phylogenies characterized by a markedly different, or "fast-evolving," clade. An updated lactate dehydrogenase molecular tree illustrates an additional fast-evolving clade.

摘要

通过系统发育分析鉴定出了一个胰蛋白酶分支,即第三组。这些胰蛋白酶存在于一生或部分时间生活在接近0摄氏度温度环境中的鱼类体内,可能代表极端嗜冷酶。氨基酸组成的主成分分析将第三组与嗜温胰蛋白酶区分开来,分子树和分子序列距离的多维标度分析也能做到这一点。第三组胰蛋白酶的一级序列,结合嗜温胰蛋白酶的已知结构,有助于深入了解其功能和冷适应机制。所采用的技术广泛适用于以明显不同或“快速进化”的分支为特征的系统发育研究。更新后的乳酸脱氢酶分子树展示了另一个快速进化的分支。

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