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冷适应的A4-乳酸脱氢酶的活化能和底物亲和力降低:来自南极南极鱼裸头冰鱼的证据。

Decreases in activation energy and substrate affinity in cold-adapted A4-lactate dehydrogenase: evidence from the Antarctic notothenioid fish Chaenocephalus aceratus.

作者信息

Fields Peter A, Houseman Daniel E

机构信息

Biology Department, Franklin and Marshall College, Lancaster, Pennsylvania, USA.

出版信息

Mol Biol Evol. 2004 Dec;21(12):2246-55. doi: 10.1093/molbev/msh237. Epub 2004 Aug 18.

Abstract

Enzyme function is strongly affected by temperature, and orthologs from species adapted to different thermal environments often show temperature compensation in kinetic properties. Antarctic notothenioid fishes live in a habitat of constant, extreme cold (-1.86 +/- 2 degrees C), and orthologs of the enzyme A4-lactate dehydrogenase (A4-LDH) in these species have adapted to this environment through higher catalytic rates, lower Arrhenius activation energies (Ea), and increases in the apparent Michaelis constant for the substrate pyruvate (Km(PYR)). Here, site-directed mutagenesis was used to determine which amino acid substitutions found in A4-LDH of the notothenioid Chaenocephalus aceratus, with respect to orthologs from warm-adapted teleosts, are responsible for these adaptive changes in enzyme function. Km(PYR) was measured in eight single and two double mutants, and Ea was tested in five single and two double mutants in the temperature range 0 degrees C-20 degrees C. Of the four mutants that had an effect on these parameters, two increased Ea but did not affect Km(PYR) (Gly224Ser, Ala310Pro), and two increased both Ea and Km(PYR) (Glu233Met, Gln317Val). The double mutants Glu233Met/Ala310Pro and Glu233Met/Gln317Val increased Km(PYR) and Ea to levels not significantly different from the A4-LDH of a warm temperate fish (Gillichthys mirabilis, habitat temperature 10 degrees C-35 degrees C). The four single mutants are associated with two alpha-helices that move during the catalytic cycle; those that affect Ea but not Km(PYR) are further from the active site than those that affect both parameters. These results provide evidence that (1) cold adaptation in A4-LDH involves changes in mobility of catalytically important molecular structures; (2) these changes may alter activation energy alone or activation energy and substrate affinity together; and (3) the extent to which these parameters are affected may depend on the location of the substitutions within the mobile alpha-helices, perhaps due to differences in proximity to the active site.

摘要

酶的功能受温度的影响很大,来自适应不同热环境物种的直系同源酶在动力学特性上常常表现出温度补偿。南极冰鱼生活在持续极端寒冷(-1.86±2℃)的栖息地,这些物种中A4-乳酸脱氢酶(A4-LDH)的直系同源酶通过更高的催化速率、更低的阿伦尼乌斯活化能(Ea)以及底物丙酮酸的表观米氏常数(Km(PYR))增加来适应这种环境。在此,利用定点诱变来确定在南极裸头鱼A4-LDH中相对于来自适应温暖环境硬骨鱼的直系同源酶所发现的哪些氨基酸取代导致了酶功能的这些适应性变化。在8个单突变体和2个双突变体中测量了Km(PYR) 值,并在5个单突变体和2个双突变体中在0℃至20℃的温度范围内测试了Ea。在对这些参数有影响的4个突变体中,2个增加了Ea但不影响Km(PYR)(Gly224Ser、Ala310Pro),2个同时增加了Ea和Km(PYR)(Glu233Met、Gln317Val)。双突变体Glu233Met/Ala310Pro和Glu233Met/Gln317Val将Km(PYR) 和Ea提高到与一种暖温带鱼类(奇氏吉丽鱼,栖息地温度10℃至35℃)的A4-LDH无显著差异的水平。这4个单突变体与催化循环中移动的两个α-螺旋相关;那些影响Ea但不影响Km(PYR) 的突变体比那些影响两个参数的突变体离活性位点更远。这些结果证明:(1)A4-LDH的冷适应涉及催化重要分子结构移动性的变化;(2)这些变化可能单独改变活化能或同时改变活化能和底物亲和力;(3)这些参数受影响的程度可能取决于取代在移动α-螺旋中的位置,这可能是由于与活性位点距离不同所致。

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