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桑科具有甘露糖特异性的凝集素波罗蜜蛋白及其与α-D-甲基甘露糖复合物的晶体结构:对碳水化合物特异性产生的影响

Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.

作者信息

Pratap J V, Jeyaprakash A Arockia, Rani P Geetha, Sekar K, Surolia A, Vijayan M

机构信息

Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India.

出版信息

J Mol Biol. 2002 Mar 22;317(2):237-47. doi: 10.1006/jmbi.2001.5432.

Abstract

The seeds of jack fruit (Artocarpus integrifolia) contain two tetrameric lectins, jacalin and artocarpin. Jacalin was the first lectin found to exhibit the beta-prism I fold, which is characteristic of the Moraceae plant lectin family. Jacalin contains two polypeptide chains produced by a post-translational proteolysis which has been shown to be crucial for generating its specificity for galactose. Artocarpin is a single chain protein with considerable sequence similarity with jacalin. It, however, exhibits many properties different from those of jacalin. In particular, it is specific to mannose. The structures of two crystal forms, form I and form II, of the native lectin have been determined at 2.4 and 2.5 A resolution, respectively. The structure of the lectin complexed with methyl-alpha-mannose, has also been determined at 2.9 A resolution. The structure is similar to jacalin, although differences exist in details. The crystal structures and detailed modelling studies indicate that the following differences between the carbohydrate binding sites of artocarpin and jacalin are responsible for the difference in the specificities of the two lectins. Firstly, artocarpin does not contain, unlike jacalin, an N terminus generated by post-translational proteolysis. Secondly, there is no aromatic residue in the binding site of artocarpin whereas there are four in that of jacalin. A comparison with similar lectins of known structures or sequences, suggests that, in general, stacking interactions with aromatic residues are important for the binding of galactose while such interactions are usually absent in the carbohydrate binding sites of mannose-specific lectins with the beta-prism I fold.

摘要

波罗蜜(Artocarpus integrifolia)种子含有两种四聚体凝集素,即jacalin和面包果凝集素。Jacalin是首个被发现具有β-棱柱I折叠结构的凝集素,这是桑科植物凝集素家族的特征。Jacalin包含两条由翻译后蛋白水解产生的多肽链,已证明这种水解对于产生其对半乳糖的特异性至关重要。面包果凝集素是一种与jacalin具有相当序列相似性的单链蛋白。然而,它表现出许多与jacalin不同的特性。特别是,它对甘露糖具有特异性。天然凝集素的两种晶体形式,即形式I和形式II,分别在2.4 Å和2.5 Å分辨率下确定了结构。与甲基-α-甘露糖复合的凝集素结构也在2.9 Å分辨率下确定。该结构与jacalin相似,尽管在细节上存在差异。晶体结构和详细的建模研究表明,面包果凝集素和jacalin的碳水化合物结合位点之间的以下差异是两种凝集素特异性差异的原因。首先,与jacalin不同,面包果凝集素不包含由翻译后蛋白水解产生的N末端。其次,面包果凝集素的结合位点没有芳香族残基,而jacalin的结合位点有四个。与已知结构或序列的类似凝集素的比较表明,一般来说,与芳香族残基的堆积相互作用对于半乳糖的结合很重要,而在具有β-棱柱I折叠结构的甘露糖特异性凝集素的碳水化合物结合位点中通常不存在这种相互作用。

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