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通过使用键和基团当量改进半经验生成热。

Improved semiempirical heats of formation through the use of bond and group equivalents.

作者信息

Repasky Matthew P, Chandrasekhar Jayaraman, Jorgensen William L

机构信息

Department of Chemistry, Yale University, 225 Prospect St., New Haven, Connecticut 06520-8107, USA.

出版信息

J Comput Chem. 2002 Mar;23(4):498-510. doi: 10.1002/jcc.10023.

DOI:10.1002/jcc.10023
PMID:11908087
Abstract

Deficiencies in energetics obtained using the common semiempirical methods, AM1, PM3, and MNDO, may partly be traced to the use of pseudoatomic equivalents for conversion of molecular energies to heats of formation at 298 K. We present an alternative scheme based on the use of bond and group equivalents. Values for the 61 bond and group equivalents necessary for treatment of molecules containing the common organic elements, hydrogen, carbon, nitrogen, and oxygen have been derived. For a set of 583 neutral, closed-shell molecules mean absolute errors in AM1, PM3, and MNDO heats of formation are reduced from 6.6, 4.2, and 8.2 kcal/mol to 2.3, 2.2, and 3.0 kcal/mol, respectively. Several systematic problems are overcome in the present scheme including relative stabilities of branched hydrocarbons, energetics of conjugated systems, heats of formation of long chain hydrocarbons, and enthalpies of molecules containing multiple heteroatoms. Although the approach is restricted to molecules with well-defined functional groups, the equivalents are easy to incorporate and are chemically relevant. This revised procedure allows semiempirical methods to be used for far more reliable evaluations of heats of reactions. Estimates are made of the errors inherent in these semiempirical formalisms, arising from integral approximations and the neglect of explicit treatment of electron correlation effects, while excluding those from inadequate parameterization.

摘要

使用常见半经验方法(AM1、PM3和MNDO)得到的能量学方面的不足,部分可以追溯到在将分子能量转换为298K时的生成热时使用了伪原子当量。我们提出了一种基于键和基团当量使用的替代方案。已经得出了处理含有常见有机元素(氢、碳、氮和氧)的分子所需的61种键和基团当量的值。对于一组583个中性闭壳层分子,AM1、PM3和MNDO生成热的平均绝对误差分别从6.6、4.2和8.2千卡/摩尔降至2.3、2.2和3.0千卡/摩尔。本方案克服了几个系统性问题,包括支链烃的相对稳定性、共轭体系的能量学、长链烃的生成热以及含有多个杂原子的分子的焓。尽管该方法仅限于具有明确官能团的分子,但当量易于纳入且具有化学相关性。这种修订后的程序使半经验方法能够用于更可靠地评估反应热。我们对这些半经验形式主义中固有的误差进行了估计,这些误差源于积分近似以及对电子相关效应的明确处理的忽略,同时排除了参数化不足导致的误差。

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