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在日本患病同胞对中进行的全基因组2型糖尿病搜索,证实了3号染色体长臂、15号染色体长臂和20号染色体长臂上的易感基因,并在7号染色体短臂和11号染色体短臂上鉴定出两个新的候选基因座。

Genome-wide search for type 2 diabetes in Japanese affected sib-pairs confirms susceptibility genes on 3q, 15q, and 20q and identifies two new candidate Loci on 7p and 11p.

作者信息

Mori Yasumichi, Otabe Shuichi, Dina Christian, Yasuda Kazuki, Populaire Céline, Lecoeur Cécile, Vatin Vincent, Durand Emmanuelle, Hara Kazuo, Okada Terumasa, Tobe Kazuyuki, Boutin Philippe, Kadowaki Takashi, Froguel Philippe

机构信息

Department of Metabolic Diseases, Graduate School of Medicine, University of Tokyo, Tokyo, Japan.

出版信息

Diabetes. 2002 Apr;51(4):1247-55. doi: 10.2337/diabetes.51.4.1247.

DOI:10.2337/diabetes.51.4.1247
PMID:11916952
Abstract

The genetic background that predisposes the Japanese population to type 2 diabetes is largely unknown. Therefore, we conducted a 10-cM genome-wide scan for type 2 diabetes traits in the 359 affected individuals from 159 families, yielding 224 affected sib-pairs of Japanese origin. Nonparametric multipoint linkage analyses performed in the whole population showed one suggestive linked region on 11p13-p12 (maximum logarithm of odds score [MLS] 3.08, near Pax6) and seven potentially linked regions (MLS >1.17) at 1p36-p32, 2q34, 3q26-q28, 6p23, 7p22-p21, 15q13-q21, and 20q12-q13 (near the gene for hepatocyte nuclear factor-4alpha [HNF-4alpha]). Subset analyses according to maximal BMI and early age at diagnosis added suggestive evidence of linkage with type 2 diabetes at 7p22-p21 (MLS 3.51), 15q13-q21 (MLS 3.91), and 20q12-q13 (MLS 2.32). These results support previous indication for linkage found on chromosome 3q, 15q, and 20q in other populations and identifies two new potential loci on 7p and 11p that may confer genetic risk for type 2 diabetes in the Japanese population.

摘要

导致日本人群易患2型糖尿病的遗传背景在很大程度上尚不清楚。因此,我们对来自159个家庭的359名2型糖尿病患者进行了10厘摩(cM)全基因组扫描,得到了224对日本裔患病同胞对。在整个人群中进行的非参数多点连锁分析显示,在11p13 - p12上有一个提示性连锁区域(最大优势对数得分[MLS] 3.08,靠近Pax6),在1p36 - p32、2q34、3q26 - q28、6p23、7p22 - p21、15q13 - q21和20q12 - q13(靠近肝细胞核因子4α[HNF - 4α]基因)有七个潜在连锁区域(MLS >1.17)。根据最大体重指数(BMI)和诊断时的早期年龄进行的亚组分析增加了在7p22 - p21(MLS 3.51)、15q13 - q21(MLS 3.91)和20q12 - q13(MLS 2.32)与2型糖尿病连锁的提示性证据。这些结果支持了先前在其他人群中在3号染色体、15号染色体和20号染色体上发现的连锁迹象,并确定了7号染色体和11号染色体上两个新的潜在基因座,它们可能赋予日本人群2型糖尿病的遗传风险。

相似文献

1
Genome-wide search for type 2 diabetes in Japanese affected sib-pairs confirms susceptibility genes on 3q, 15q, and 20q and identifies two new candidate Loci on 7p and 11p.在日本患病同胞对中进行的全基因组2型糖尿病搜索,证实了3号染色体长臂、15号染色体长臂和20号染色体长臂上的易感基因,并在7号染色体短臂和11号染色体短臂上鉴定出两个新的候选基因座。
Diabetes. 2002 Apr;51(4):1247-55. doi: 10.2337/diabetes.51.4.1247.
2
Type 2 diabetes: evidence for linkage on chromosome 20 in 716 Finnish affected sib pairs.2型糖尿病:716对芬兰患病同胞对中20号染色体连锁的证据。
Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):2198-203. doi: 10.1073/pnas.96.5.2198.
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No evidence for linkage at candidate type 2 diabetes susceptibility loci on chromosomes 12 and 20 in United Kingdom Caucasians.在英国白种人中,未发现12号和20号染色体上2型糖尿病候选易感基因座存在连锁的证据。
J Clin Endocrinol Metab. 2000 Feb;85(2):853-7. doi: 10.1210/jcem.85.2.6395.
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Exclusion of the hepatocyte nuclear factor 4alpha as a candidate gene for late-onset NIDDM linked with chromosome 20q.排除肝细胞核因子4α作为与20号染色体相关的晚发性非胰岛素依赖型糖尿病候选基因。
Diabetes. 1998 Jun;47(6):970-2. doi: 10.2337/diabetes.47.6.970.
5
Genomewide search for type 2 diabetes-susceptibility genes in French whites: evidence for a novel susceptibility locus for early-onset diabetes on chromosome 3q27-qter and independent replication of a type 2-diabetes locus on chromosome 1q21-q24.在法国白人中进行全基因组范围的2型糖尿病易感基因搜索:3号染色体q27-qter区域存在早发性糖尿病新易感位点的证据以及1号染色体q21-q24区域2型糖尿病位点的独立验证。
Am J Hum Genet. 2000 Dec;67(6):1470-80. doi: 10.1086/316887. Epub 2000 Nov 6.
6
Mutation screening in 18 Caucasian families suggest the existence of other MODY genes.对18个白种人家庭进行的突变筛查表明存在其他青少年发病的成年型糖尿病基因。
Diabetologia. 1998 Sep;41(9):1017-23. doi: 10.1007/s001250051025.
7
Genome-wide linkage analysis of type 2 diabetes mellitus reconfirms the susceptibility locus on 11p13-p12 in Japanese.
J Hum Genet. 2004;49(11):629-634. doi: 10.1007/s10038-004-0199-3. Epub 2004 Oct 14.
8
A common polymorphism in the upstream promoter region of the hepatocyte nuclear factor-4 alpha gene on chromosome 20q is associated with type 2 diabetes and appears to contribute to the evidence for linkage in an ashkenazi jewish population.位于20号染色体上的肝细胞核因子4α基因上游启动子区域的一种常见多态性与2型糖尿病相关,并且似乎为阿什肯纳兹犹太人群体中的连锁证据提供了支持。
Diabetes. 2004 Apr;53(4):1134-40. doi: 10.2337/diabetes.53.4.1134.
9
Genetic variation near the hepatocyte nuclear factor-4 alpha gene predicts susceptibility to type 2 diabetes.肝细胞核因子-4α基因附近的遗传变异可预测2型糖尿病易感性。
Diabetes. 2004 Apr;53(4):1141-9. doi: 10.2337/diabetes.53.4.1141.
10
A susceptibility locus for early-onset non-insulin dependent (type 2) diabetes mellitus maps to chromosome 20q, proximal to the phosphoenolpyruvate carboxykinase gene.早发性非胰岛素依赖型(2型)糖尿病的一个易感基因座定位于20号染色体长臂,靠近磷酸烯醇丙酮酸羧激酶基因。
Hum Mol Genet. 1997 Sep;6(9):1401-8. doi: 10.1093/hmg/6.9.1401.

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