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复制终止序列处的复制叉坍塌。

Replication fork collapse at replication terminator sequences.

作者信息

Bidnenko Vladimir, Ehrlich S Dusko, Michel Bénédicte

机构信息

Laboratoire de Génétique Microbienne, Institut National de la Recherche Agronomique, 78352 Jouy en Josas, France.

出版信息

EMBO J. 2002 Jul 15;21(14):3898-907. doi: 10.1093/emboj/cdf369.

DOI:10.1093/emboj/cdf369
PMID:12110601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC126115/
Abstract

Replication fork arrest is a source of genome re arrangements, and the recombinogenic properties of blocked forks are likely to depend on the cause of blockage. Here we study the fate of replication forks blocked at natural replication arrest sites. For this purpose, Escherichia coli replication terminator sequences Ter were placed at ectopic positions on the bacterial chromosome. The resulting strain requires recombinational repair for viability, but replication forks blocked at Ter are not broken. Linear DNA molecules are formed upon arrival of a second round of replication forks that copy the DNA strands of the first blocked forks to the end. A model that accounts for the requirement for homologous recombination for viability in spite of the lack of chromosome breakage is proposed. This work shows that natural and accidental replication arrests sites are processed differently.

摘要

复制叉停滞是基因组重排的一个来源,而受阻复制叉的重组特性可能取决于阻滞的原因。在这里,我们研究了在天然复制停滞位点受阻的复制叉的命运。为此,将大肠杆菌复制终止序列Ter置于细菌染色体的异位位置。产生的菌株需要重组修复才能存活,但在Ter处受阻的复制叉不会断裂。第二轮复制叉到达时会形成线性DNA分子,这些复制叉将第一个受阻复制叉的DNA链复制到末端。我们提出了一个模型,该模型解释了尽管没有染色体断裂,但仍需要同源重组才能存活的原因。这项工作表明,天然和偶然的复制停滞位点的处理方式不同。

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本文引用的文献

1
Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans.双链断裂和DNA末端的重组:从噬菌体到人类的保守机制
Mol Cell. 2001 Dec;8(6):1163-74. doi: 10.1016/s1097-2765(01)00419-1.
2
The relative contributions of recombination and point mutation to the diversification of bacterial clones.重组和点突变对细菌克隆多样化的相对贡献。
Curr Opin Microbiol. 2001 Oct;4(5):602-6. doi: 10.1016/s1369-5274(00)00257-5.
3
Mechanism of termination of DNA replication of Escherichia coli involves helicase-contrahelicase interaction.大肠杆菌DNA复制终止机制涉及解旋酶与反解旋酶的相互作用。
Proc Natl Acad Sci U S A. 2001 Aug 14;98(17):9569-74. doi: 10.1073/pnas.171065898. Epub 2001 Aug 7.
4
Homologous DNA recombination in vertebrate cells.脊椎动物细胞中的同源DNA重组。
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8388-94. doi: 10.1073/pnas.111006398.
5
Single-strand interruptions in replicating chromosomes cause double-strand breaks.复制染色体中的单链中断会导致双链断裂。
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8241-6. doi: 10.1073/pnas.131009198.
6
Circles: the replication-recombination-chromosome segregation connection.循环:复制-重组-染色体分离的联系
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8189-95. doi: 10.1073/pnas.111008998.
7
Rescue of arrested replication forks by homologous recombination.通过同源重组拯救停滞的复制叉。
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8181-8. doi: 10.1073/pnas.111008798.
8
Characterization of homologous recombination induced by replication inhibition in mammalian cells.哺乳动物细胞中复制抑制诱导的同源重组的特征分析。
EMBO J. 2001 Jul 16;20(14):3861-70. doi: 10.1093/emboj/20.14.3861.
9
Multiple pathways cooperate in the suppression of genome instability in Saccharomyces cerevisiae.多条途径协同作用以抑制酿酒酵母中的基因组不稳定性。
Nature. 2001 Jun 28;411(6841):1073-6. doi: 10.1038/35082608.
10
Chromosomal stability and the DNA double-stranded break connection.染色体稳定性与DNA双链断裂的联系。
Nat Rev Genet. 2001 Mar;2(3):196-206. doi: 10.1038/35056049.