PDB Goodies——一个用于操作蛋白质数据库文件的基于网络的图形用户界面。
PDB Goodies--a web-based GUI to manipulate the Protein Data Bank file.
作者信息
Hussain A S Z, Shanthi V, Sheik S S, Jeyakanthan J, Selvarani P, Sekar K
机构信息
Bioinformatics Centre, Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore 560 012, India.
出版信息
Acta Crystallogr D Biol Crystallogr. 2002 Aug;58(Pt 8):1385-6. doi: 10.1107/s090744490200985x. Epub 2002 Jul 20.
PDB Goodies is a web-based graphical user interface (GUI) to manipulate the Protein Data Bank file containing the three-dimensional atomic coordinates of protein structures. The program also allows users to save the manipulated three-dimensional atomic coordinate file on their local client system. These fragments are used in various stages of structure elucidation and analysis. This software is incorporated with all the three-dimensional protein structures available in the Protein Data Bank, which presently holds approximately 18 000 structures. In addition, this program works on a three-dimensional atomic coordinate file (Protein Data Bank format) uploaded from the client machine. The program is written using CGI/PERL scripts and is platform independent. The program PDB Goodies can be accessed over the World Wide Web at http://144.16.71.11/pdbgoodies/.
PDB Goodies是一个基于网络的图形用户界面（GUI），用于操作包含蛋白质结构三维原子坐标的蛋白质数据库文件。该程序还允许用户将经过操作的三维原子坐标文件保存在其本地客户端系统上。这些片段用于结构解析和分析的各个阶段。此软件整合了蛋白质数据库中所有可用的三维蛋白质结构，目前该数据库约有18000个结构。此外，该程序可处理从客户端机器上传的三维原子坐标文件（蛋白质数据库格式）。该程序使用CGI/PERL脚本编写，与平台无关。可通过万维网在http://144.16.71.11/pdbgoodies/访问PDB Goodies程序。
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