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对在甲硫氨酸甲基中特别富集了¹³C的抹香鲸肌红蛋白的核磁共振研究。

Nuclear magnetic resonance studies of sperm whale myoglobin specifically enriched with 13C in the methionine methyl groups.

作者信息

Jones W C, Rothgeb T M, Gurd F R

出版信息

J Biol Chem. 1976 Dec 10;251(23):7452-60.

PMID:12165
Abstract

The Cepsilon methyl group of the 2 methionine residues in sperm whale myoglobin was enriched with respect to 13C. This was accomplished by treatment of the apomyoglobin at pH 4 at room temperature with a 100-fold proportion of 13CH3I to form an intermediate containing enriched S-methylmethionine. Unselective demethylation to regain the apomyoglobin structure was accomplished by treatment at pH 10.5 with 0.5 M dithioerythritol at 37 degrees for 18 h. Reagents were removed at each stage by dialysis against dilute sodium azide solution. Hemin was reincorporated to form the holoprotein in a way that avoided the presence of an excess of the small molecule. After chromatographic purification the enriched myoglobin was obtained in a yield of between 29 and 60%. The composition, absorbance spectrum, circular dichroism spectrum, isoionic point, electrophoretic behavior, and oxygen-binding behavior following reduction were all indistinguishable from those of the virgin protein. NMR measurements were made at 15.1, 25.2, and 67.9 MHz at 27-30 degrees. The two enriched loci are represented by separate resonances that appear slightly downfield of the spectral position of the corresponding resonance in free methionine. The positions of these resonances are sensitive to pH and to the ligand bound at the heme group which is approximately 17 A distant from each methionine Cepsilon. On the basis of two separate types of experiment the downfield resonance was assigned to methionine 55 and the upfield resonance to methionine 131. Part of the observed variations in chemical shift could be treated as arising from pseudocontact interactions but part was ascribed to structural changes communicated to the environment of each methionine residue as a result of changes in heme ligand, pH, or temperature. The linewidths of the methionine Cepsilon resonances are narrowed by increasing temperature according to an Arrhenius energy of activation of nearly 3 kcal. The spin-lattice relaxation times, T1, of the two methionine Cepsilon resonances at the three spectrometer frequencies were interpreted to indicate the existence of rotational motions in each side chain in addition to that about the Sdelta-Cepsilon bond. The results as a whole show that the two methionine side chains undergo continuous variations in environment, and that these variations are controlled by events at a distance within the protein structure. It is suggested that the structural lability serves the function of facilitating conformational variations and adjustments within the heme pocket.

摘要

抹香鲸肌红蛋白中两个甲硫氨酸残基的ε-碳甲基相对于¹³C得到了富集。这是通过在室温下于pH 4用100倍量的¹³CH₃I处理脱辅基肌红蛋白来实现的,从而形成一种含有富集的S-甲基甲硫氨酸的中间体。通过在pH 10.5用0.5 M二硫苏糖醇在37℃处理18小时来实现非选择性脱甲基以恢复脱辅基肌红蛋白结构。在每个阶段通过对稀叠氮化钠溶液进行透析来除去试剂。以避免小分子过量的方式重新掺入血红素以形成全蛋白。经过色谱纯化后,得到的富集肌红蛋白产率在29%至60%之间。还原后的组成、吸收光谱、圆二色光谱、等离子点、电泳行为和氧结合行为与天然蛋白的均无区别。在27 - 30℃下于15.1、25.2和67.9 MHz进行核磁共振测量。两个富集位点由单独的共振表示,这些共振出现在游离甲硫氨酸中相应共振光谱位置的稍低场处。这些共振的位置对pH以及与血红素基团结合的配体敏感,血红素基团与每个甲硫氨酸的ε-碳相距约17 Å。基于两种不同类型的实验,低场共振被指定为甲硫氨酸55,高场共振被指定为甲硫氨酸131。观察到的化学位移变化的一部分可被视为由赝接触相互作用引起,但一部分归因于由于血红素配体、pH或温度的变化而传递到每个甲硫氨酸残基环境中的结构变化。甲硫氨酸ε-碳共振的线宽根据近3千卡的阿仑尼乌斯活化能随温度升高而变窄。在三个光谱仪频率下两个甲硫氨酸ε-碳共振的自旋晶格弛豫时间T₁被解释为表明除了围绕Sδ - ε-碳键的旋转运动外,每个侧链中还存在旋转运动。总体结果表明,两个甲硫氨酸侧链的环境在不断变化,并且这些变化受蛋白质结构内远处事件的控制。有人提出,结构的不稳定有助于血红素口袋内的构象变化和调整。

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