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利用自连接淬灭探针进行细菌中RNA的成像。

Imaging of RNA in bacteria with self-ligating quenched probes.

作者信息

Sando Shinsuke, Kool Eric T

机构信息

Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.

出版信息

J Am Chem Soc. 2002 Aug 21;124(33):9686-7. doi: 10.1021/ja026649g.

DOI:10.1021/ja026649g
PMID:12175209
Abstract

We report on the application of a new class of oligonucleotide reporter probes, QUAL probes, that "light up" when a nucleophilic phosphorothioate probe binds adjacent to a dabsyl-quenched probe. These self-ligating DNA probes were used for sequence-specific detection of 16S rRNA in Escherichia coli cells. Strong fluorescence was observed only when the phosphorothioate and quenched dabsyl probes bind side-by-side on a 16S rRNA target. The results demonstrate the use of QUAL probes to detect specific RNA sequences in bacterial cells without enzymes and without washing steps.

摘要

我们报道了一类新型寡核苷酸报告探针——QUAL探针的应用,当亲核硫代磷酸酯探针与达布酰淬灭探针相邻结合时,该探针会“发光”。这些自连接DNA探针用于大肠杆菌细胞中16S rRNA的序列特异性检测。只有当硫代磷酸酯探针和淬灭的达布酰探针在16S rRNA靶标上并排结合时,才会观察到强烈的荧光。结果表明,QUAL探针可用于在无需酶和洗涤步骤的情况下检测细菌细胞中的特定RNA序列。

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