• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

植物微小RNA靶标的预测

Prediction of plant microRNA targets.

作者信息

Rhoades Matthew W, Reinhart Brenda J, Lim Lee P, Burge Christopher B, Bartel Bonnie, Bartel David P

机构信息

Whitehead Institute for Biomedical Research, 9 Cambridge Center, MA 02142, USA.

出版信息

Cell. 2002 Aug 23;110(4):513-20. doi: 10.1016/s0092-8674(02)00863-2.

DOI:10.1016/s0092-8674(02)00863-2
PMID:12202040
Abstract

We predict regulatory targets for 14 Arabidopsis microRNAs (miRNAs) by identifying mRNAs with near complementarity. Complementary sites within predicted targets are conserved in rice. Of the 49 predicted targets, 34 are members of transcription factor gene families involved in developmental patterning or cell differentiation. The near-perfect complementarity between plant miRNAs and their targets suggests that many plant miRNAs act similarly to small interfering RNAs and direct mRNA cleavage. The targeting of developmental transcription factors suggests that many plant miRNAs function during cellular differentiation to clear key regulatory transcripts from daughter cell lineages.

摘要

我们通过识别具有近乎互补性的mRNA来预测14个拟南芥微小RNA(miRNA)的调控靶标。预测靶标内的互补位点在水稻中是保守的。在49个预测靶标中,34个是参与发育模式形成或细胞分化的转录因子基因家族的成员。植物miRNA与其靶标之间近乎完美的互补性表明,许多植物miRNA的作用类似于小干扰RNA,并指导mRNA的切割。对发育转录因子的靶向作用表明,许多植物miRNA在细胞分化过程中发挥作用,以清除子细胞谱系中的关键调控转录本。

相似文献

1
Prediction of plant microRNA targets.植物微小RNA靶标的预测
Cell. 2002 Aug 23;110(4):513-20. doi: 10.1016/s0092-8674(02)00863-2.
2
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA.一类拟南芥miRNA介导的稻草人样mRNA靶标的切割
Science. 2002 Sep 20;297(5589):2053-6. doi: 10.1126/science.1076311.
3
Plant science. When vernalization makes sense.植物科学。春化作用何时具有意义。
Science. 2011 Jan 7;331(6013):36-7. doi: 10.1126/science.1200786.
4
Role of an atypical E2F transcription factor in the control of Arabidopsis cell growth and differentiation.一种非典型E2F转录因子在拟南芥细胞生长和分化调控中的作用。
Plant Cell. 2004 Sep;16(9):2350-63. doi: 10.1105/tpc.104.023978. Epub 2004 Aug 12.
5
Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.全基因组平铺微阵列和 siRNAs 分析反义表达表明拟南芥孤儿蛋白编码基因的错误注释。
PLoS One. 2010 May 26;5(5):e10710. doi: 10.1371/journal.pone.0010710.
6
Alternative Polyadenylation of the Sense Transcript Controls Antisense Transcription of DELAY OF GERMINATION 1 in Arabidopsis.正义转录本的可变聚腺苷酸化调控拟南芥中萌发延迟1的反义转录
Mol Plant. 2017 Oct 9;10(10):1349-1352. doi: 10.1016/j.molp.2017.07.011. Epub 2017 Aug 3.
7
Who, where, how many?谁,在哪里,有多少?
Nat Cell Biol. 2007 Jun;9(6):623. doi: 10.1038/ncb0607-623.
8
Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.拟南芥微小RNA及其mRNA靶标的预测与鉴定。
Genome Biol. 2004;5(9):R65. doi: 10.1186/gb-2004-5-9-r65. Epub 2004 Aug 31.
9
Cloning and characterization of microRNAs from rice.水稻中微小RNA的克隆与特性分析
Plant Cell. 2005 May;17(5):1397-411. doi: 10.1105/tpc.105.031682. Epub 2005 Apr 1.
10
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes.微小RNA对拟南芥生长素响应因子17的调控对正常发育至关重要,并调节早期生长素响应基因的表达。
Plant Cell. 2005 May;17(5):1360-75. doi: 10.1105/tpc.105.031716. Epub 2005 Apr 13.

引用本文的文献

1
The MIR157-SPL15 module regulates flowering and inflorescence development in Arabidopsis thaliana under short days and in Arabis alpina.MIR157-SPL15模块在短日照条件下调控拟南芥以及高山南芥的开花和花序发育。
PLoS Genet. 2025 Sep 2;21(9):e1011799. doi: 10.1371/journal.pgen.1011799. eCollection 2025 Sep.
2
A cryptic START domain regulates deeply conserved transcription factors.一个隐秘的起始结构域调控深度保守的转录因子。
bioRxiv. 2025 Aug 1:2025.07.29.667167. doi: 10.1101/2025.07.29.667167.
3
Improved Degradome Sequencing Protocol via Reagent Recycling from sRNAseq Library Preparations.
通过从小RNA测序文库制备中回收试剂改进降解组测序方案。
Int J Mol Sci. 2025 Jul 21;26(14):7020. doi: 10.3390/ijms26147020.
4
Blooming resilience: transcriptomic insights into cotton flower responses to boll weevil infestation.绽放的韧性:棉花花朵对棉铃象甲侵害反应的转录组学洞察
Plant Cell Rep. 2025 May 6;44(6):113. doi: 10.1007/s00299-025-03503-z.
5
Involvement of the miR156/SPLs/NLP7 modules in plant lateral root development and nitrogen uptake.miR156/SPLs/NLP7模块在植物侧根发育和氮吸收中的作用。
Planta. 2025 May 5;261(6):127. doi: 10.1007/s00425-025-04688-z.
6
Transposon-Associated Small RNAs Involved in Plant Defense in Poplar.参与杨树植物防御的转座子相关小RNA
Plants (Basel). 2025 Apr 21;14(8):1265. doi: 10.3390/plants14081265.
7
MpmiR319 promotes gemma/gemma cup formation in the liverwort Marchantia polymorpha.MpmiR319促进地钱多歧苔肝脏中芽孢/芽孢杯的形成。
J Exp Bot. 2025 Aug 21;76(12):3378-3389. doi: 10.1093/jxb/eraf148.
8
Identification of the co-regulatory siRNAs of "miRNA→target" in Oryza sativa.水稻中“miRNA→靶标”共调控小干扰RNA的鉴定
PLoS One. 2025 Apr 3;20(4):e0321182. doi: 10.1371/journal.pone.0321182. eCollection 2025.
9
Molecular mechanisms driving the unusual pigmentation shift during eggplant fruit development.驱动茄子果实发育过程中异常色素沉着转变的分子机制。
Plant Commun. 2025 May 12;6(5):101321. doi: 10.1016/j.xplc.2025.101321. Epub 2025 Mar 25.
10
Risk assessment considerations for RNAi-based genetically modified plants.基于RNA干扰的转基因植物的风险评估考量
EFSA J. 2025 Mar 21;23(3):e9321. doi: 10.2903/j.efsa.2025.9321. eCollection 2025 Mar.