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作为研究黑腹果蝇反转录转座工具的内切核酸酶缺陷型标记I元件的反式互补作用

Trans-complementation of an endonuclease-defective tagged I element as a tool for the study of retrotransposition in Drosophila melanogaster.

作者信息

Robin S, Chambeyron S, Brun C, Bucheton A, Busseau I

机构信息

Institut de Génétique Humaine, CNRS, 141 Rue de la Cardonille, 34396 Montpellier Cedex 5, France.

出版信息

Mol Genet Genomics. 2002 Aug;267(6):829-34. doi: 10.1007/s00438-002-0716-z. Epub 2002 Jul 9.

DOI:10.1007/s00438-002-0716-z
PMID:12207231
Abstract

I factors are non-LTR retrotransposons of Drosophila melanogaster that transpose at high frequency in the germline of females resulting from appropriate crosses, allowing in vivo studies of the retrotransposition process. Reverse transcription of a full-length RNA intermediate is thought to occur at the site of integration, using a 3' hydroxyl group generated by endonucleolytic cleavage of the genomic DNA to prime synthesis of the first cDNA strand. This target-primed reverse transcription (TPRT) process is mediated by endonuclease and reverse transcriptase activities encoded by the element. We have designed a molecularly tagged, endonuclease-defective I element that can be mobilised with high efficiency by constructs that express the product of the I factor ORF2 in trans. This indicates that the endonuclease activity required for retrotransposition of the I factor can be provided in trans. Using this system, we show that the endonuclease domain of the R1Bm retrotransposon from Bombyx mori cannot functionally replace that of the I factor.

摘要

I因子是黑腹果蝇的非LTR逆转座子,在适当杂交产生的雌性生殖系中高频转座,从而能够对逆转座过程进行体内研究。全长RNA中间体的逆转录被认为发生在整合位点,利用基因组DNA内切核酸酶切割产生的3'羟基来起始第一条cDNA链的合成。这种靶标引发的逆转录(TPRT)过程由该元件编码的内切核酸酶和逆转录酶活性介导。我们设计了一种分子标记的、内切核酸酶缺陷的I元件,它可以被反式表达I因子ORF2产物的构建体高效动员。这表明I因子逆转座所需的内切核酸酶活性可以反式提供。利用这个系统,我们发现家蚕R1Bm逆转座子的内切核酸酶结构域不能在功能上替代I因子的内切核酸酶结构域。

相似文献

1
Trans-complementation of an endonuclease-defective tagged I element as a tool for the study of retrotransposition in Drosophila melanogaster.作为研究黑腹果蝇反转录转座工具的内切核酸酶缺陷型标记I元件的反式互补作用
Mol Genet Genomics. 2002 Aug;267(6):829-34. doi: 10.1007/s00438-002-0716-z. Epub 2002 Jul 9.
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Footprint of the retrotransposon R2Bm protein on its target site before and after cleavage.逆转座子R2Bm蛋白在切割前后其靶位点上的印记。
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Expression of the Idefix retrotransposon in early follicle cells in the germarium of Drosophila melanogaster is determined by its LTR sequences and a specific genomic context.果蝇卵巢生殖区早期卵泡细胞中Idefix逆转座子的表达由其长末端重复序列(LTR)和特定的基因组环境决定。
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A genetically tagged, defective I element can be complemented by actively transposing I factors in the germline of I-R dysgenic females in Drosophila melanogaster.一个带有基因标记的缺陷型I因子,可以被黑腹果蝇中I-R杂种不育雌性种系中活跃转座的I因子所互补。
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引用本文的文献

1
Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori.家蚕中特定于端粒的非长末端重复序列反转录转座子与端粒维持
Chromosome Res. 2005;13(5):455-67. doi: 10.1007/s10577-005-0990-9.
2
In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein.非长末端重复逆转座子I因子的体内RNA定位需要开放阅读框2(ORF2)和开放阅读框1(ORF1)蛋白中的顺式作用信号。
Nucleic Acids Res. 2005 Feb 1;33(2):776-85. doi: 10.1093/nar/gki221. Print 2005.