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从兼性需氧细菌嗜冷希瓦氏菌中分离出的一种四血红素细胞色素的热力学特征:黄素细胞色素c3的一种假定氧化还原模型

Thermodynamic characterization of a tetrahaem cytochrome isolated from a facultative aerobic bacterium, Shewanella frigidimarina: a putative redox model for flavocytochrome c3.

作者信息

Pessanha Miguel, Louro Ricardo O, Correia Ilídio J, Rothery Emma L, Pankhurst Kate L, Reid Graeme A, Chapman Stephen K, Turner David L, Salgueiro Carlos A

机构信息

Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Rua da Quinta Grande 6, 2780-156 Oeiras, Portugal.

出版信息

Biochem J. 2003 Mar 1;370(Pt 2):489-95. doi: 10.1042/BJ20021408.

Abstract

The facultative aerobic bacterium Shewanella frigidimarina produces a small c-type tetrahaem cytochrome (86 residues) under anaerobic growth conditions. This protein is involved in the respiration of iron and shares 42% sequence identity with the N-terminal domain of a soluble flavocytochrome, isolated from the periplasm of the same bacterium, which also contains four c -type haem groups. The thermodynamic properties of the redox centres and of an ionizable centre in the tetrahaem cytochrome were determined using NMR and visible spectroscopy techniques. This is the first detailed thermodynamic study performed on a tetrahaem cytochrome isolated from a facultative aerobic bacterium and reveals that this protein presents unique features. The redox centres have negative and different redox potentials, which are modulated by redox interactions between the four haems (covering a range of 8-56 mV) and by redox-Bohr interactions between the haems and an ionizable centre (-4 to -36 mV) located in close proximity to haem III. All of the interactions between the five centres are clearly dominated by electrostatic effects and the microscopic reduction potential of haem III is the one most affected by the oxidation of the other haems and by the protonation state of the molecule. Altogether, this study indicates that the tetrahaem cytochrome isolated from S. frigidimarina (Sfc) has the thermodynamic properties to work as an electron wire between its redox partners. Considering the high degree of sequence identity between Sfc and the cytochrome domain of flavocytochrome c(3), the structural similarities of the haem core, and that the macroscopic potentials are also identical, the results obtained in this work are rationalized in order to put forward a putative redox model for flavocytochrome c(3).

摘要

兼性需氧细菌嗜冷希瓦氏菌在厌氧生长条件下会产生一种小型c型四血红素细胞色素(86个氨基酸残基)。该蛋白参与铁的呼吸作用,与从同一细菌周质中分离出的可溶性黄素细胞色素的N端结构域具有42%的序列同一性,后者也含有四个c型血红素基团。利用核磁共振和可见光谱技术测定了四血红素细胞色素中氧化还原中心和一个可电离中心的热力学性质。这是首次对从兼性需氧细菌中分离出的四血红素细胞色素进行的详细热力学研究,结果表明该蛋白具有独特的特性。氧化还原中心具有负的且不同的氧化还原电位,这些电位受到四个血红素之间的氧化还原相互作用(范围为8 - 56 mV)以及血红素与位于血红素III附近的一个可电离中心之间的氧化还原-玻尔相互作用(-4至-36 mV)的调节。五个中心之间的所有相互作用显然都由静电效应主导,血红素III的微观还原电位是受其他血红素氧化和分子质子化状态影响最大的一个。总的来说,这项研究表明从嗜冷希瓦氏菌中分离出的四血红素细胞色素具有作为其氧化还原伙伴之间的电子导线发挥作用的热力学性质。考虑到嗜冷希瓦氏菌细胞色素与黄素细胞色素c(3)的细胞色素结构域之间的高度序列同一性、血红素核心的结构相似性以及宏观电位也相同,对本研究获得的结果进行了合理化分析,以便提出黄素细胞色素c(3)的一个假定氧化还原模型。

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