Crowe Mark L, Serizet Carine, Thareau Vincent, Aubourg Sébastien, Rouzé Pierre, Hilson Pierre, Beynon Jim, Weisbeek Peter, van Hummelen Paul, Reymond Philippe, Paz-Ares Javier, Nietfeld Wilfried, Trick Martin
The John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, UK.
Nucleic Acids Res. 2003 Jan 1;31(1):156-8. doi: 10.1093/nar/gkg071.
The Complete Arabidopsis Transcriptome Micro Array (CATMA) database contains gene sequence tag (GST) and gene model sequences for over 70% of the predicted genes in the Arabidopsis thaliana genome as well as primer sequences for GST amplification and a wide range of supplementary information. All CATMA GST sequences are specific to the gene for which they were designed, and all gene models were predicted from a complete reannotation of the genome using uniform parameters. The database is searchable by sequence name, sequence homology or direct SQL query, and is available through the CATMA website at http://www.catma.org/.
拟南芥全转录组微阵列(CATMA)数据库包含了拟南芥基因组中70%以上预测基因的基因序列标签(GST)和基因模型序列,以及GST扩增引物序列和大量补充信息。所有CATMA GST序列都特定于其设计所针对的基因,并且所有基因模型都是使用统一参数从基因组的完整重新注释中预测出来的。该数据库可通过序列名称、序列同源性或直接SQL查询进行搜索,可通过CATMA网站(http://www.catma.org/)获取。