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大肠杆菌隔离突变体seqA2中SeqA焦点形成、特异性DNA结合及适当蛋白质多聚化的缺失。

Lack of SeqA focus formation, specific DNA binding and proper protein multimerization in the Escherichia coli sequestration mutant seqA2.

作者信息

Fossum Solveig, Søreide Sølvi, Skarstad Kirsten

机构信息

Department of Cell Biology, Institute for Cancer Research, Montebello, 0310 Oslo, Norway.

出版信息

Mol Microbiol. 2003 Feb;47(3):619-32. doi: 10.1046/j.1365-2958.2003.t01-1-03329.x.

DOI:10.1046/j.1365-2958.2003.t01-1-03329.x
PMID:12535065
Abstract

In Escherichia coli wild-type cells newly formed origins cannot be reinitiated. The prevention of reinitiation is termed sequestration and is dependent on the hemimethylated state of newly replicated DNA. Several mutants discovered in a screen for the inability to sequester hemimethylated origins have been mapped to the seqA gene. Here, one of these mutants, seqA2, harbouring a single amino acid change in the C-terminal end of the SeqA protein, was found to also be unable to form foci in vivo. The SeqA foci seen in the wild-type cells are believed to arise from multimerization of SeqA on hemimethylated DNA at the replication fork, presumably representing organization of newly formed DNA by SeqA. The result suggests that the process of origin sequestration is closely tied to the process of focus maintenance at the replication fork. In vitro, purified SeqA2 protein was found incapable of forming highly ordered multimers that bind hemimethylated oriC. The mutant protein was also incapable of restraining negative supercoils. Both in vivo and in vitro results support the idea that origin sequestration is an integral part of organization of newly formed DNA performed by SeqA.

摘要

在大肠杆菌野生型细胞中,新形成的复制起点不能重新起始。防止重新起始被称为隔离,并且依赖于新复制DNA的半甲基化状态。在筛选不能隔离半甲基化起点的过程中发现的几个突变体已被定位到seqA基因。在这里,这些突变体之一seqA2,在SeqA蛋白的C末端有一个单氨基酸变化,被发现也不能在体内形成焦点。野生型细胞中看到的SeqA焦点被认为是由于SeqA在复制叉处的半甲基化DNA上多聚化产生的,大概代表了SeqA对新形成DNA的组织。结果表明,起点隔离过程与复制叉处焦点维持过程密切相关。在体外,发现纯化的SeqA2蛋白不能形成结合半甲基化oriC的高度有序的多聚体。突变蛋白也不能抑制负超螺旋。体内和体外结果都支持这样的观点,即起点隔离是SeqA对新形成DNA进行组织的一个组成部分。

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Lack of SeqA focus formation, specific DNA binding and proper protein multimerization in the Escherichia coli sequestration mutant seqA2.大肠杆菌隔离突变体seqA2中SeqA焦点形成、特异性DNA结合及适当蛋白质多聚化的缺失。
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E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration.大肠杆菌SeqA蛋白通过两种不同的甲基调节反应与oriC结合,这两种反应与其在DNA复制起始和复制起点隔离中的作用相适应。
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Co-ordination between membrane oriC sequestration factors and a chromosome partitioning protein, TolC (MukA).膜oriC隔离因子与染色体分配蛋白TolC(MukA)之间的协调作用。
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引用本文的文献

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Front Microbiol. 2018 Nov 2;9:2637. doi: 10.3389/fmicb.2018.02637. eCollection 2018.
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SeqA structures behind Escherichia coli replication forks affect replication elongation and restart mechanisms.大肠杆菌复制叉后的SeqA结构影响复制延伸和重启机制。
Nucleic Acids Res. 2017 Jun 20;45(11):6471-6485. doi: 10.1093/nar/gkx263.
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The DnaA Protein Is Not the Limiting Factor for Initiation of Replication in Escherichia coli.
DnaA蛋白不是大肠杆菌复制起始的限制因素。
PLoS Genet. 2015 Jun 5;11(6):e1005276. doi: 10.1371/journal.pgen.1005276. eCollection 2015 Jun.
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Dynamic Escherichia coli SeqA complexes organize the newly replicated DNA at a considerable distance from the replisome.动态的大肠杆菌SeqA复合物在距复制体相当远的距离处组织新复制的DNA。
Nucleic Acids Res. 2015 Mar 11;43(5):2730-43. doi: 10.1093/nar/gkv146. Epub 2015 Feb 26.
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Establishing and maintaining sequestration of Dam target sites for phase variation of agn43 in Escherichia coli.建立并维持大肠杆菌 agn43 相变异的 Dam 靶位点的隔离。
J Bacteriol. 2010 Apr;192(7):1937-45. doi: 10.1128/JB.01629-09. Epub 2010 Jan 29.
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Correlation between ribonucleoside-diphosphate reductase and three replication proteins in Escherichia coli.大肠杆菌中核甙二磷酸还原酶与三种复制蛋白的关系。
BMC Mol Biol. 2010 Jan 26;11:11. doi: 10.1186/1471-2199-11-11.
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A reduction in ribonucleotide reductase activity slows down the chromosome replication fork but does not change its localization.核苷酸还原酶活性的降低会减缓染色体复制叉的速度,但不会改变其定位。
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Excess SeqA prolongs sequestration of oriC and delays nucleoid segregation and cell division.过量的SeqA会延长oriC的隔离时间,并延迟类核区的分离和细胞分裂。
EMBO J. 2003 Jan 15;22(2):315-23. doi: 10.1093/emboj/cdg020.