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用于钩端螺旋体鉴定的低严谨度单特异性引物PCR

Low-stringency single specific primer PCR for identification of Leptospira.

作者信息

Oliveira Marluce A Assunção, Caballero Otávia L, Vago Annamaria R, Harskeerl Rudy A, Romanha Álvaro J, Pena Sérgio D J, Simpson Andrew J G, Koury Matilde Cota

机构信息

Departamento de Microbiologia1, Departamento de Morfologia2 and Departamento de Bioquímica e Imunologia3, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos, 6627, CP 486, CEP: 31270-901, Belo Horizonte, Minas Gerais, Brazil 4Laboratory of Cancer Genetics, Ludwig Institute for Cancer Research, São Paulo, Brazil 5Department of Biomedical Research, Royal Tropical Institute, Amsterdam, The Netherlands 6Centro de Pesquisas 'René Rachou' - FIOCRUZ, Belo Horizonte, Minas Gerais, Brazil.

出版信息

J Med Microbiol. 2003 Feb;52(Pt 2):127-135. doi: 10.1099/jmm.0.04923-0.

Abstract

Thirty-five Leptospira serovars from the species Leptospira interrogans, Leptospira borgpetersenii, Leptospira santarosai, Leptospira kirschneri, Leptospira weilii, Leptospira biflexa and Leptospira meyeri were characterized by the low-stringency single specific primer PCR (LSSP-PCR) technique. LSSP-PCR analysis was performed to detect DNA polymorphisms in a 285 bp DNA fragment amplified from genomic DNA with G1 and G2 selected primers. Similar LSSP-PCR profiles were obtained for serovars from the same genomic species, while serovars from non-related species produced distinct multiband patterns. Based on the data from sequence analysis, all genomic fragments amplified with G1 and G2 primers from distinct serovars of Leptospira were 285 bp in length, with nucleotide variation observed most frequently among different genomic species. The simplicity and accuracy of the LSSP-PCR technique were found to be suitable for identification of Leptospira species.

摘要

采用低严谨度单特异性引物PCR(LSSP-PCR)技术对问号钩端螺旋体、波摩那钩端螺旋体、圣塔罗莎钩端螺旋体、克氏钩端螺旋体、魏氏钩端螺旋体、双曲钩端螺旋体和迈耶钩端螺旋体这35个血清型进行了鉴定。利用G1和G2选择引物从基因组DNA中扩增出一个285bp的DNA片段,通过LSSP-PCR分析检测其DNA多态性。同一基因组种的血清型获得了相似的LSSP-PCR图谱,而来自非相关种的血清型则产生了不同的多带模式。基于序列分析数据,用G1和G2引物从不同钩端螺旋体血清型中扩增出的所有基因组片段长度均为285bp,不同基因组种之间核苷酸变异最为常见。结果发现,LSSP-PCR技术的简单性和准确性适合于钩端螺旋体种的鉴定。

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