Suppr超能文献

基于共振拉曼光谱的肌红蛋白远端口袋突变体中的FeNO结构。

FeNO structure in distal pocket mutants of myoglobin based on resonance Raman spectroscopy.

作者信息

Coyle Candace M, Vogel Kathleen M, Rush Thomas S, Kozlowski Pawel M, Williams Robert, Spiro Thomas G, Dou Yi, Ikeda-Saito Masao, Olson John S, Zgierski Marek Z

机构信息

Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA.

出版信息

Biochemistry. 2003 May 6;42(17):4896-903. doi: 10.1021/bi026395b.

Abstract

FeNO vibrational frequencies were investigated for a series of myoglobin mutants using isotope-edited resonance Raman spectra of (15/14)NO adducts, which reveal the FeNO and NO stretching modes. The latter give rise to doublet bands, as a result of Fermi resonances with coincident porphyrin vibrations; these doublets were analyzed by curve-fitting to obtain the nuNO frequencies. Variations in nuNO among the mutants correlate with the reported nuCO variations for the CO adducts of the same mutants. The correlation has a slope near unity, indicating equal sensitivity of the NO and CO bonds to polar influences in the heme pocket. A few mutants deviate from the correlation, indicating that distal interactions differ for the NO and CO adducts, probably because of the differing distal residue geometries. In contrast to the strong and consistent nuFeC/nuCO correlation found for the CO adducts, nuFeN correlates only weakly with nuNO, and the slope of the correlation depends on which residue is being mutated. This variability is suggested to arise from steric interactions, which change the FeNO angle and therefore alter the Fe-NO and N-O bond orders. This effect is modeled with Density Functional Theory (DFT) and is rationalized on the basis of a valence isomer bonding model. The FeNO unit, which is naturally bent, is a more sensitive reporter of steric interactions than the FeCO unit, which is naturally linear. An important additional factor is the strength of the bond to the proximal ligand, which modulates the valence isomer equilibrium. The FeNO unit is bent more strongly in MbNO than in protein-free heme-NO complexes because of a combination of a strengthened proximal bond and distal interactions.

摘要

利用(15/14)NO加合物的同位素编辑共振拉曼光谱研究了一系列肌红蛋白突变体的FeNO振动频率,该光谱揭示了FeNO和NO伸缩模式。由于与卟啉振动重合产生费米共振,后者产生双峰带;通过曲线拟合分析这些双峰以获得νNO频率。突变体之间νNO的变化与相同突变体的CO加合物报道的νCO变化相关。该相关性的斜率接近1,表明NO和CO键对血红素口袋中极性影响的敏感性相同。一些突变体偏离该相关性,表明NO和CO加合物的远端相互作用不同,可能是由于远端残基几何形状不同。与CO加合物中发现的强烈且一致的νFeC/νCO相关性相反,νFeN与νNO的相关性较弱,且相关性的斜率取决于突变的是哪个残基。这种变异性被认为是由空间相互作用引起的,空间相互作用改变了FeNO角度,从而改变了Fe-NO和N-O键级。用密度泛函理论(DFT)对这种效应进行了建模,并基于价键异构体键合模型进行了合理化解释。天然弯曲的FeNO单元比天然线性的FeCO单元对空间相互作用更敏感。一个重要的额外因素是与近端配体的键强度,它调节价键异构体平衡。由于近端键和远端相互作用增强,FeNO单元在MbNO中比在无蛋白血红素-NO复合物中弯曲得更强烈。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验